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obot

9 Projects

anchor-bio

Last released on Jul 14, 2016

Anchor is a python package to estimate modality of splicing, percent methylated, any data that is normalized between 0 and 1

bonvoyage

Last released on Jul 14, 2016

Transform percentage-based units into a 2d space to evaluate changes in distribution with both magnitude and direction.

flotilla

Last released on Aug 8, 2016

Embark on a journey of single-cell data exploration.

macosko2015

Last released on Jun 26, 2017

Expression data for Macosko et al, "Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets," Cell (2015)

modish

Last released on Jul 13, 2015

Modish is a python package to estimate modality of splicing, percent methylated, any data that is normalized between 0 and 1

outrigger

Last released on Apr 4, 2017

Outrigger detects *de novo* exons and quantifies their percent spliced-in

poshsplice

Last released on Jul 14, 2016

Poshsplice makes your splicing events fancy (posh) by annotating them!

prettyplotlib

Last released on Mar 4, 2014

Painlessly create beautiful default `matplotlib` plots.

sj2psi

Last released on Aug 7, 2015

Convert RNA-STAR SJ.out.tab files to 5-prime and 3-prime "percent spliced in" ("psi") scores.

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