abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ Edit
Anchor is a python package to estimate modality of splicing, percent methylated, any data that is normalized between 0 and 1
Transform percentage-based units into a 2d space to evaluate changes in distribution with both magnitude and direction.
Embark on a journey of single-cell data exploration.
Joyplots and more for single cells
Expression data for Lönnberg + Svensson et al, "Single-cell RNA-seq and computational analysis using temporal mixture modelling resolves Th1/Tfh fate bifurcation in malaria," Science Immunology (2017)
Expression data for Macosko et al, "Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets," Cell (2015)
Modish is a python package to estimate modality of splicing, percent methylated, any data that is normalized between 0 and 1
Outrigger detects *de novo* exons and quantifies their percent spliced-in
Poshsplice makes your splicing events fancy (posh) by annotating them!
Painlessly create beautiful default `matplotlib` plots.
Convert RNA-STAR SJ.out.tab files to 5-prime and 3-prime "percent spliced in" ("psi") scores.