6 projects
celloracle-lite
Lightweight fork of CellOracle for GRN analysis with reduced dependencies
hummuspy
HuMMuS is a novel method for the inference of regulatory mechanisms from multi-omics data with any type and number of omics, through a heterogeneous multilayer network framework.
recon
ReCoN: [Reconstruction of multicellular systems from single-cell data to predict perturbation responses and cell programs coordination]
circe-py
Circe: Package for building co-accessibility networks from ATAC-seq data.
atacnet
Package for building co-accessibility networks from ATAC-seq data.
profile-maboss
A package allowing personalisation of MaBoSS models with the PROFILE methodology defined in [paper_ref]
