9 projects
pyfgs
Python bindings to FragGeneScanRs for fast, error-tolerant bacterial ORF prediction
kaptive
The tool for _in silico_ serotyping
kaptive-web
Web interface for Kaptive, the tool for _in silico_ serotyping
foldgemma
FoldGemma: Protein folding language models
rammappy
A Python interface to rammap, the Rust implementation of minimap2
seroepi
A Python library for bacterial sero-epidemiology
zani
A zero-dependency, ultra-fast Average Nucleotide Identity (ANI) estimator using Zstandard compression distance.
pyeris
Graph-aware contextual annotation of targeted genomic features
kaptive-plot
Plotting library for Kaptive, the tool for in silico serotyping
