11 projects
seroverse
Core data structures, graph algorithms, and async database clients for the SeroVerse ecosystem
shiny-kit
Object-oriented PyShiny component architecture, reactive descriptors, introspective widgets, and two-tier model caching
kbank
Geno-glycomic database for bacterial glycans
seroepi
A Python library for bacterial sero-epidemiology
serogen
Genomic analysis for in silico serotyping
pyfgs
Python bindings to FragGeneScanRs for fast, error-tolerant bacterial ORF prediction
kaptive
The tool for _in silico_ serotyping
kaptive-web
Web interface for Kaptive, the tool for _in silico_ serotyping
rammappy
A Python interface to rammap, the Rust implementation of minimap2
pyeris
Graph-aware contextual annotation of targeted genomic features
kaptive-plot
Plotting library for Kaptive, the tool for in silico serotyping
