24 projects
jupyterlab-sos
JupyterLab extension for SoS workflow engine and polyglot notebook
simuPOP
Forward-time population genetics simulation environment
sos-notebook
Script of Scripts (SoS): an interactive, cross-platform, and cross-language workflow system for reproducible data analysis
transient-display-data
Extension to display transient_display_data in Jupyter Lab
sos-matlab
SoS Notebook extension for Matlab and Octave
sos
Script of Scripts (SoS): an interactive, cross-platform, and cross-language workflow system for reproducible data analysis
covid19-outbreak-simulator
Population-based Forward-time Simulator for the Outbreak of COVID-19
sos-rmarkdown
A Rmarkdown to SoS Notebook converter
sos-javascript
SoS Notebook extension for JavaScript
sos-pbs
PBS task engine for Script of Scripts (SoS)
sos-papermill
SoS extension for papermill
sos-sas
SoS Notebook extension for SAS
markdown-kernel
A markdown kernel for Jupyter
sos-r
SoS Notebook extension for language R
sos-julia
SoS Notebook extension for languages Julia
variant-tools
Variant tools: an integrated annotation and analysis package for next-generation sequencing data
sos-bash
batch execusion actions and bash kernel extension for sos
sos-python
SoS Notebook extension for languages Python 2 and Python 3
sos-ruby
SoS Notebook extension for Ruby
sos-rq
PBS task engine for Script of Scripts (SoS)
sos-stata
SoS Notebook extension for Stata
sos-scala
SoS Notebook extension for Scala
sos-bioinfo
SoS Notebook extension for bioinformatics applications
sos-essentials
Essential components of Script of Scripts (SoS)