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PBS task engine for Script of Scripts (SoS)

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PBS task engine for SoS Workflow

A workflow engine for SoS Workflow that allows the submission of tasks to PBS systems. Currently supported cluster systems include PBS, PBS Pro, Torque, SLURM, IBM LSF, and Sun Grid. Other cluster systems are probably also supported but we do not have access to one and cannot test sos-pbs against it.


sos-pbs is needed for sos to submit tasks to PBS-based environments, but is not needed for the execution of tasks on such environments. That is to say, sos-pbs is not needed on a remote cluster system (whereas sos is needed there).

Conda-based installation

If you are using a conda environment, use command

conda install sos-pbs -c conda-forge

to install sos-pbs and sos to your system.

Pip-based installation

If you are not using conda, you can install sos-pbs with command

pip install sos-pbs


Please refer to SoS Homepage and SoS Workflow documentation for details.

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