A webscraper to automate retrieving specific data from CAZy andbuild a local CAZyme SQL database, for throughly interrogating the data. Also, automate retrieving protein sequences and structure files for specific datasets in the CAZyme database.
ncfp is a script and module that facilitates recovery of nucleotide sequences from NCBI encoding a specified set of input protein sequences
pyani provides a package and script for calculation of genome-scale average nucleotide identity.
lpbio provides scripts and modules for computational biology
pyADHoRe provides a data structure for import and manipulation of i-ADHoRe output.