7 projects
folitools
Foli-seq data processing and analysis tools
umi-tools-folitools
Fork of UMI-tools with Python 3.12+ packaging support for folitools. Installs the same `umi_tools` package and CLI as upstream.
cutadapt-folitools
Fork of cutadapt with folitools performance patches (SeedMultiAdapterFilter, pigz input, NPrefixIndexedAdapters). Installs the same `cutadapt` module and CLI as upstream.
sgad
Exact pairwise and 3D sequence alignment utilities
masato
Modular Amplicon Sequencing Analysis TOokit
easy-amplicon
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positional-embeddings-pytorch
A collection of positional embeddings (or positional encodings) written in pytorch.
