15 projects
WAZP
Wasp Animal-tracking Zoo project with Pose estimation
ethology
Data processing tools for animal behavioural analysis
fancylog
Fancier logging in Python
datashuttle
DataShuttle automates the creation, validation and transfer of neuroscience project folders.
movement
A Python toolbox for analysing animal body movements across space and time
beekeeping
Manage video metadata for animal behaviour experiments
poseinterface
A framework for benchmarking pose estimation and point tracking methods on animal beheviour videos.
driftplots
Interactively visualise Kilosort drift maps for checking inter-session alignment.
derotation
Derotate multiphoton calcium imaging movies
slurmio
Python tools to read SLURM job parameters
photon-mosaic
Automating calcium imaging analysis
suite2p-NIU
Pipeline for calcium imaging (fork of the original suite2p)
qt-niu
Reusable Qt elements
spikewrap
Run extracellular electrophysiology analysis with SpikeInterface
oscar-colony
A python package for breeding calculations.
