Interactively visualise Kilosort drift maps for checking inter-session alignment.
Project description
driftplots
driftplots is a package for plotting drift maps from Kilosort (1-4) or SpikeInterface's SortingAnalyzer.
Interactive mode (above) allows selection of spikes to view the associated template, and is useful for checking the alignment of two sorted sessions:
Static matplotlib figures are also supported, and come with a range of options for customising the displayed data and plots:
driftplots is currently in beta release. Please get in touch if you find any issues.
Get started
See the documentation and locally runnable
examples for full details on how to use driftplots.
The package can be installed with:
pip install driftplots
to download the examples and example data, clone this repository and install locally when in the project root with:
pip install -e .
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