19 projects
dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
acres
Access resources on your terms
eddymotion
Pure python eddy-current and head-motion correction for dMRI, an extension of QSIprep's SHOREline algorithm (Cieslak, 2020) to multiple diffusion models.
fmriprep
A robust and easy-to-use pipeline for preprocessing of diverse fMRI data
fmriprep-docker
A wrapper for generating Docker commands using regular fMRIPrep syntax
mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain.
mriqc-learn
Learning on MRIQC-generated image quality metrics (IQMs).
nibabies
Processing workflows for magnetic resonance images of the brain in infants
nipreps-versions
Version schemes for nipreps tools
nireports
NiReports - The Visual Report System (VRS) of NiPreps
nirodents
NeuroImaging Rodents (NiRodents) provides processing tools for magnetic resonance images of the rodent brain.
niworkflows
NeuroImaging Workflows provides processing tools for magnetic resonance images of the brain.
sdcflows
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes.
smriprep
Structural MRI Preprocessing Pipelines
smriprep-docker
A wrapper for generating Docker commands using regular sMRIPrep syntax
templateflow
TemplateFlow Python Client - TemplateFlow is the Zone of neuroimaging templates.
petprep
A robust and easy-to-use pipeline for preprocessing of diverse PET data
petprep-docker
A wrapper for generating Docker commands using regular PETPrep syntax
nifreeze
A flexible framework for volume-to-volume artifact estimation and correction across multiple 4D neuroimaging modalities (diffusion MRI, functional MRI, and PET).
