CIRIquant
CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantification in RNA-Seq data
Documentation
Documentation is available online at https://ciri-cookbook.readthedocs.io/en/latest/
Author
Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)
Maintainer: Jinyang Zhang
Release Notes
- Version 1.1: Added support for stranded library and GFF3 format input.
- Version 1.0: The first released version of CIRIquant.
License
The code is released under the MIT License. See the LICENSE file for more detail.
Citing CIRIquant
- Zhang, J., Chen, S., Yang, J. et al. Accurate quantification of circular RNAs identifies extensive circular isoform switching events. Nat Commun 11, 90 (2020) doi:10.1038/s41467-019-13840-9
1 maintainer
Metadata
1 maintainer
Release files for CIRIquant 1.1.3
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| CIRIquant-1.1.3.tar.gz | 39.7 kB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| CIRIquant-1.1.3-py2-none-any.whl | Python 2 | none | any | Details |
Total release size: 84.4 kB
Release files / CIRIquant-1.1.3.tar.gz
| Download URL | CIRIquant-1.1.3.tar.gz |
|---|---|
| Size | 39.7 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Release files / CIRIquant-1.1.3-py2-none-any.whl
| Download URL | CIRIquant-1.1.3-py2-none-any.whl |
|---|---|
| Size | 44.7 kB |
| Tags | Python 2 |
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SHA-256 checksum How to use checksums |
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Security for CIRIquant 1.1.3
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