CIRIquant
CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantification in RNA-Seq data
Documentation
Documentation is available online at https://ciri-cookbook.readthedocs.io/en/latest/
Author
Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)
Maintainer: Jinyang Zhang
Release Notes
- Version 1.1: Added support for stranded library and GFF3 format input.
- Version 1.0: The first released version of CIRIquant.
License
The code is released under the MIT License. See the LICENSE file for more detail.
Citing CIRIquant
- Zhang, J., Chen, S., Yang, J. et al. Accurate quantification of circular RNAs identifies extensive circular isoform switching events. Nat Commun 11, 90 (2020) doi:10.1038/s41467-019-13840-9
1 maintainer
Release files for CIRIquant 1.1.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| CIRIquant-1.1.3.tar.gz | 39.7 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| CIRIquant-1.1.3-py2-none-any.whl | Python 2 | none | any | Details |
Total release size: 84.4 kB
Release files / CIRIquant-1.1.3.tar.gz
| Download URL | CIRIquant-1.1.3.tar.gz |
|---|---|
| Size | 39.7 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
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twine/1.15.0 pkginfo/1.7.0 requests/2.25.1 setuptools/44.1.1 requests-toolbelt/0.9.1 tqdm/4.59.0 CPython/2.7.18
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Release files / CIRIquant-1.1.3-py2-none-any.whl
| Download URL | CIRIquant-1.1.3-py2-none-any.whl |
|---|---|
| Size | 44.7 kB |
| Tags | Python 2 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/1.15.0 pkginfo/1.7.0 requests/2.25.1 setuptools/44.1.1 requests-toolbelt/0.9.1 tqdm/4.59.0 CPython/2.7.18
|
