circular RNA quantification pipeline
Project description
CIRIquant
CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantification in RNA-Seq data
Documentation
Documentation is available online at https://ciri-cookbook.readthedocs.io/en/latest/
Author
Authors: Jinyang Zhang(zhangjinyang@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)
Maintainer: Jinyang Zhang
Release Notes
- Version 1.1: Added support for stranded library and GFF3 format input.
- Version 1.0: The first released version of CIRIquant.
License
The code is released under the MIT License. See the LICENSE file for more detail.
Citing CIRIquant
- Zhang, J., Chen, S., Yang, J. et al. Accurate quantification of circular RNAs identifies extensive circular isoform switching events. Nat Commun 11, 90 (2020) doi:10.1038/s41467-019-13840-9
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