Make ordering and assembly plans for DNA sequences

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  • License Expression: MIT
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  • Author: Zulko
  • Tags DNA , optimization , assembly , ordering , synthetic , biology
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Project description

DNA Weaver is a Python library to find optimal strategies for assembling large DNA constructs. Given an arbitrary sequence, DNA Weaver will select the most adapted commercial DNA providers, cloning methods and parts repositories (depending on your preferences), and will design all necessary assembly fragments and assembly steps.

DNA Weaver was written with versatility and extensibility in mind: each DNA source and assembly method can be customized, and assembly plans can be optimized with respect to total price, overall duration of the assembly, or assembly success probabilities.

Infos

PIP installation:

pip install dnaweaver

Web documentation:

https://edinburgh-genome-foundry.github.io/DnaWeaver/

Github Page

https://github.com/Edinburgh-Genome-Foundry/Dnaweaver

Live demo

https://dnaweaver.genomefoundry.org

License: MIT

Copyright 2021, 2025 Edinburgh Genome Foundry, University of Edinburgh

More biology software

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png

DNA Weaver is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.

Project details

Verified details

These details have been verified by PyPI
Project links
GitHub Statistics
Maintainers
Avatar for EdinburghGenomeFoundry from gravatar.com EdinburghGenomeFoundry

Unverified details

These details have not been verified by PyPI
Meta
  • License Expression: MIT
    SPDX License Expression
  • Author: Zulko
  • Tags DNA , optimization , assembly , ordering , synthetic , biology

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This version

0.3.10

0.3.9

0.3.8

0.3.7

0.3.6

0.3.5

0.3.4

0.3.2

0.3.1

0.3.0

0.2.0

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