Skip to main content

Make ordering and assembly plans for DNA sequences

Project description

DNA Weaver is a Python library to find optimal strategies for assembling large DNA constructs. Given an arbitrary sequence, DNA Weaver will select the most adapted commercial DNA providers, cloning methods and parts repositories (depending on your preferences), and will design all necessary assembly fragments and assembly steps.

DNA Weaver was written with versatility and extensibility in mind: each DNA source and assembly method can be customized, and assembly plans can be optimized with respect to total price, overall duration of the assembly, or assembly success probabilities.

Infos

PIP installation:

pip install dnaweaver

Web documentation:

https://edinburgh-genome-foundry.github.io/DnaWeaver/

Github Page

https://github.com/Edinburgh-Genome-Foundry/Dnaweaver

Live demo

https://dnaweaver.genomefoundry.org

License: MIT, Copyright Edinburgh Genome Foundry

More biology software

https://raw.githubusercontent.com/Edinburgh-Genome-Foundry/Edinburgh-Genome-Foundry.github.io/master/static/imgs/logos/egf-codon-horizontal.png

DNA Weaver is part of the EGF Codons synthetic biology software suite for DNA design, manufacturing and validation.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

DnaWeaver-0.3.8.tar.gz (298.5 kB view hashes)

Uploaded Source

Built Distribution

DnaWeaver-0.3.8-py3-none-any.whl (312.1 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page