Automatic reconstruction of draft metabolic networks with Pathway Tools and graph-based metabolic analysis
Project description
metage2metabo is a Python3 workflow to perform graph-based metabolic analysis starting from annotated genomes. It uses Pathway Tools in a automatic and parallel way to reconstruct metabolic networks for a large number of genomes. The obtained metabolic networks are then analyzed individually and collectively in order to get the added value of cooperation in microbiota over individual metabolism, and to identify and screen interesting organisms among all. More information on usage and troubleshooting on Github: https://github.com/aureme/metage2metabo
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
File details
Details for the file Metage2Metabo-1.1.5.tar.gz.
File metadata
- Download URL: Metage2Metabo-1.1.5.tar.gz
- Upload date:
- Size: 2.9 MB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.9.1 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.19.5 CPython/3.6.8
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
3529acc4d0fab20c84c6660206c0300d7a5d2b44ab6f8e8b1a8dbea6b560b6ff
|
|
| MD5 |
9d2602e81a2dfb8cf2556ec39977a13b
|
|
| BLAKE2b-256 |
52c3d54645f3fd0b869631fc2b52582665b109b087013cd727196eecf9d8c6d1
|
