Orange Bioinformatics add-on for Orange data mining software package.
Orange Bioinformatics provides access to publicly available data, like GEO data sets, GO and KEGG. It enables gene enrichment analysis, clustering, classification, gene identification and provides several common visualizations. All features can be combined with other widgets from the Orange data mining framework. See documentation.
- access to GEO data sets
- access to GO database
- access to KEGG pathways database
- plot differential gene expression
- visualize diagrams of molecular interactions, reactions, and relations
- enrich gene sets
- cluster analysis
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