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Orange Bioinformatics add-on for Orange data mining software package.

Project description

Orange3 Bioinformatics

Orange Bioinformatics provides access to publicly available data, like GEO data sets, GO and KEGG. It enables gene enrichment analysis, clustering, classification, gene identification and provides several common visualizations. All features can be combined with other widgets from the Orange data mining framework. See documentation.

Features

Data access

  • access to GEO data sets
  • access to GO database
  • access to KEGG pathways database

Bioinformatics analysis

  • plot differential gene expression
  • visualize diagrams of molecular interactions, reactions, and relations
  • enrich gene sets
  • cluster analysis

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Source Distribution

Orange3-Bioinformatics-4.5.0.tar.gz (2.9 MB view hashes)

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