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Project Description

Usage

>>> import os
>>> from RISparser import readris
>>> from pprint import pprint

>>> filepath = 'tests/example_full.ris'
>>> with open(filepath, 'r') as bibliography_file:
...     entries = readris(bibliography_file)
...     for entry in entries:
...         pprint(entry)
{'abstract': 'BACKGROUND: Lorem ipsum dolor sit amet, consectetuer adipiscing elit. Aenean commodo ligula eget dolor. Aenean massa. Cum sociis natoque penatibus et magnis dis parturient montes, nascetur ridiculus mus.  RESULTS: Donec quam felis, ultricies nec, pellentesque eu, pretium quis, sem. Nulla consequat massa quis enim. CONCLUSIONS: Donec pede justo, fringilla vel, aliquet nec, vulputate eget, arcu. In enim justo, rhoncus ut, imperdiet a, venenatis vitae, justo. Nullam dictum felis eu pede mollis pretium.',
 'alternate_title2': 'lorem',
 'alternate_title3': 'Lorem',
 'file_attachments2': 'http://example.com',
 'first_authors': ['Marx, Karl', 'Lindgren, Astrid'],
 'id': '12345',
 'issn': '1932-6208',
 'keywords': ['Pippi', 'Nordwind', 'Piraten'],
 'note': '1008150341',
 'number': '3',
 'place_published': 'United States',
 'primary_title': 'Title of reference',
 'publication_year': '2014//',
 'publisher': 'Fun Factory',
 'secondary_authors': ['Glattauer, Daniel'],
 'start_page': 'e0815',
 'type_of_reference': 'JOUR',
 'url': 'http://example_url.com',
 'volume': '9'}
{'abstract': 'BACKGROUND: Lorem dammed ipsum dolor sit amet, consectetuer adipiscing elit. Aenean commodo ligula eget dolor. Aenean massa. Cum sociis natoque penatibus et magnis dis parturient montes, nascetur ridiculus mus.  RESULTS: Donec quam felis, ultricies nec, pellentesque eu, pretium quis, sem. Nulla consequat massa quis enim. CONCLUSIONS: Donec pede justo, fringilla vel, aliquet nec, vulputate eget, arcu. In enim justo, rhoncus ut, imperdiet a, venenatis vitae, justo. Nullam dictum felis eu pede mollis pretium.',
 'alternate_title2': 'lorem',
 'alternate_title3': 'Lorem',
 'file_attachments2': 'http://example2.com',
 'first_authors': ['Marxus, Karlus', 'Lindgren, Astrid'],
 'id': '12345',
 'issn': '1732-4208',
 'keywords': ['Pippi Langstrumpf', 'Nordwind', 'Piraten'],
 'note': '1228150341',
 'number': '3',
 'place_published': 'Germany',
 'primary_title': 'The title of the reference',
 'publication_year': '2006//',
 'publisher': 'Dark Factory',
 'secondary_authors': ['Glattauer, Daniel'],
 'start_page': 'e0815341',
 'type_of_reference': 'JOUR',
 'url': 'http://example_url.com',
 'volume': '6'}

>>> with open(filepath, 'r') as bibliography_file:
...     entries = readris(bibliography_file)
...     entries_list = list(entries)
...     print(len(entries_list))
2

Example RIS entry

1.
TY  - JOUR
ID  - 12345
T1  - Title of reference
A1  - Marx, Karl
A1  - Lindgren, Astrid
A2  - Glattauer, Daniel
Y1  - 2014//
N2  - BACKGROUND: Lorem ipsum dolor sit amet, consectetuer adipiscing elit. Aenean commodo ligula eget dolor. Aenean massa. Cum sociis natoque penatibus et magnis dis parturient montes, nascetur ridiculus mus.  RESULTS: Donec quam felis, ultricies nec, pellentesque eu, pretium quis, sem. Nulla consequat massa quis enim. CONCLUSIONS: Donec pede justo, fringilla vel, aliquet nec, vulputate eget, arcu. In enim justo, rhoncus ut, imperdiet a, venenatis vitae, justo. Nullam dictum felis eu pede mollis pretium.
KW  - Pippi
KW  - Nordwind
KW  - Piraten
JF  - Lorem
JA  - lorem
VL  - 9
IS  - 3
SP  - e0815
CY  - United States
PB  - Fun Factory
PB  - Fun Factory USA
SN  - 1932-6208
M1  - 1008150341
L2  - http://example.com
ER  -

TAG_KEY_MAPPING

The most fields contain string values, but some like first_authors (A1) are parsed into lists.

Complete list of ListType tags

>>> from RISparser.config import LIST_TYPE_TAGS
>>> pprint(LIST_TYPE_TAGS)
['A1', 'A2', 'A3', 'A4', 'AU', 'KW']

Complete default mapping

>>> from RISparser.config import TAG_KEY_MAPPING
>>> pprint(TAG_KEY_MAPPING)
{'A1': 'first_authors',
 'A2': 'secondary_authors',
 'A3': 'tertiary_authors',
 'A4': 'subsidiary_authors',
 'AB': 'abstract',
 'AD': 'author_address',
 'AN': 'accession_number',
 'AU': 'authors',
 'C1': 'custom1',
 'C2': 'custom2',
 'C3': 'custom3',
 'C4': 'custom4',
 'C5': 'custom5',
 'C6': 'custom6',
 'C7': 'custom7',
 'C8': 'custom8',
 'CA': 'caption',
 'CN': 'call_number',
 'CY': 'place_published',
 'DA': 'date',
 'DB': 'name_of_database',
 'DO': 'doi',
 'DP': 'database_provider',
 'EP': 'end_page',
 'ER': 'end_of_reference',
 'ET': 'edition',
 'ID': 'id',
 'IS': 'number',
 'J2': 'alternate_title1',
 'JA': 'alternate_title2',
 'JF': 'alternate_title3',
 'KW': 'keywords',
 'L1': 'file_attachments1',
 'L2': 'file_attachments2',
 'L4': 'figure',
 'LA': 'language',
 'LB': 'label',
 'M1': 'note',
 'M3': 'type_of_work',
 'N1': 'notes',
 'N2': 'abstract',
 'NV': 'number_of_Volumes',
 'OP': 'original_publication',
 'PB': 'publisher',
 'PY': 'year',
 'RI': 'reviewed_item',
 'RN': 'research_notes',
 'RP': 'reprint_edition',
 'SE': 'version',
 'SN': 'issn',
 'SP': 'start_page',
 'ST': 'short_title',
 'T1': 'primary_title',
 'T2': 'secondary_title',
 'T3': 'tertiary_title',
 'TA': 'translated_author',
 'TI': 'title',
 'TT': 'translated_title',
 'TY': 'type_of_reference',
 'UR': 'url',
 'VL': 'volume',
 'Y1': 'publication_year',
 'Y2': 'access_date'}

Override key mapping

The parser use a TAG_KEY_MAPPING, witch one can override by calling readris() with a custom mapping.

>>> import os
>>> from RISparser import readris, TAG_KEY_MAPPING
>>> from pprint import pprint

>>> filepath = 'tests/example_full.ris'
>>> mapping = TAG_KEY_MAPPING
>>> mapping["SP"] = "pages"
>>> with open(filepath, 'r') as bibliography_file:
...     entries = list(readris(bibliography_file, mapping=mapping))
...     pprint(entries[0])
{'abstract': 'BACKGROUND: Lorem ipsum dolor sit amet, consectetuer adipiscing elit. Aenean commodo ligula eget dolor. Aenean massa. Cum sociis natoque penatibus et magnis dis parturient montes, nascetur ridiculus mus.  RESULTS: Donec quam felis, ultricies nec, pellentesque eu, pretium quis, sem. Nulla consequat massa quis enim. CONCLUSIONS: Donec pede justo, fringilla vel, aliquet nec, vulputate eget, arcu. In enim justo, rhoncus ut, imperdiet a, venenatis vitae, justo. Nullam dictum felis eu pede mollis pretium.',
 'alternate_title2': 'lorem',
 'alternate_title3': 'Lorem',
 'file_attachments2': 'http://example.com',
 'first_authors': ['Marx, Karl', 'Lindgren, Astrid'],
 'id': '12345',
 'issn': '1932-6208',
 'keywords': ['Pippi', 'Nordwind', 'Piraten'],
 'note': '1008150341',
 'number': '3',
 'pages': 'e0815',
 'place_published': 'United States',
 'primary_title': 'Title of reference',
 'publication_year': '2014//',
 'publisher': 'Fun Factory',
 'secondary_authors': ['Glattauer, Daniel'],
 'type_of_reference': 'JOUR',
 'url': 'http://example_url.com',
 'volume': '9'}
Release History

Release History

0.4.1

This version

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

0.4

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

0.3.1

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

0.3

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

0.2

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

Show More

0.1

History Node

TODO: Figure out how to actually get changelog content.

Changelog content for this version goes here.

Donec et mollis dolor. Praesent et diam eget libero egestas mattis sit amet vitae augue. Nam tincidunt congue enim, ut porta lorem lacinia consectetur. Donec ut libero sed arcu vehicula ultricies a non tortor. Lorem ipsum dolor sit amet, consectetur adipiscing elit.

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Download Files

Download Files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
RISparser-0.4.1.tar.gz (8.4 kB) Copy SHA256 Checksum SHA256 Source Jan 19, 2015

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