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Unified tabular + vector storage in a single Iceberg-compatible file

Project description

ailake — AI-Lake Format Python SDK

Version: 0.1.1 — Unified storage for tabular data, embeddings, and HNSW vector index in a single Parquet-compatible file. Apache Iceberg Spec v2/v3 compatible.

Install

pip install ailake

Requires Python ≥ 3.9. Dependencies: pyarrow >= 14.0, numpy >= 1.24.

Quickstart

Write + search — fluent API (recommended)

import ailake
import numpy as np

# Open or create a table
table = ailake.open_table(
    "./my_table",
    dim=1536,
    metric="cosine",          # cosine | euclidean | dot_product | normalized_cosine
    pre_normalize=True,       # normalize at write time; enables fast 1-dot(a,b) path
    hnsw_m=16,                # HNSW connections per node (default 16)
    hnsw_ef_construction=150,
    embedding_model="text-embedding-3-small",  # tracked in Iceberg metadata
    embedding_model_version="v1",
)

texts = ["Document about AI", "Another document"]
embeddings = np.random.rand(2, 1536).astype(np.float32)

table.insert(texts, embeddings)   # accepts list or numpy array
snapshot_id = table.commit()

# Tabular metadata columns alongside text + embedding
table.insert(
    texts, embeddings,
    extra_columns={"id": [1, 2], "category": ["news", "blog"]},  # type inferred from 1st element
)
table.commit()

# Pattern B — auto-embed without passing embeddings explicitly
def my_embed(texts: list[str]) -> list[list[float]]:
    return np.random.rand(len(texts), 1536).tolist()  # replace with real model

table2 = ailake.open_table("./my_table2", dim=1536, embed_fn=my_embed)
table2.insert(["Document about AI", "Another document"])  # embed_fn called automatically
table2.commit()

# Pointer-only search (default — backward-compatible)
df      = table.search(embeddings[0], top_k=10).to_pandas()   # row_id, distance, file
lf      = table.search(embeddings[0]).limit(5).to_polars()
results = table.search(embeddings[0]).to_list()   # list[dict]

# Full row data — all Parquet columns + _distance
df_full = table.search(embeddings[0], top_k=10, fetch_data=True).to_pandas()

Async API

import ailake, asyncio
import numpy as np

async def main():
    table = ailake.open_table("./my_table", dim=1536)
    await table.insert_async(texts, embeddings)
    await table.commit_async()

    # fluent async chain
    df = await table.search(query_vec).limit(10).to_pandas_async()

    # parallel searches via asyncio.gather
    r1, r2 = await asyncio.gather(
        table.search(q1).to_list_async(),
        table.search(q2).to_list_async(),
    )

asyncio.run(main())

Module-level search

import ailake
import numpy as np

query = np.random.rand(1536).astype(np.float32)

df     = ailake.search("./my_table", query, top_k=10).to_pandas()
lf     = ailake.search("./my_table", query).limit(5).to_polars()
items  = ailake.search("./my_table", query).to_list()

Assemble context for LLMs

import ailake

chunks = [
    {
        "document_id": "doc-1",
        "chunk_index": 0,
        "chunk_text": "AI-Lake stores vectors and tabular data together.",
        "document_title": "AI-Lake Overview",
        "section_path": "Introduction",
        "source_uri": "s3://my-lake/docs/overview.pdf",
        "distance": 0.12,
    },
]

context_xml = ailake.assemble_context(
    chunks=chunks,
    max_tokens=4096,       # token budget (4 chars ≈ 1 token)
    dedup_threshold=0.05,  # drop near-duplicate chunks
)
# Pass context_xml directly to Claude / GPT-4 as a user message

API reference

open_table(path, *, ...) → Table

Opens or creates an AI-Lake table at path.

Parameter Default Description
path required Table root (local, s3://, gs://, az://)
vector_column "embedding" Vector column name
dim 1536 Embedding dimension
metric "cosine" cosine, euclidean, dot_product, normalized_cosine
pre_normalize False Normalize to unit L2 at write; enables 1-dot(a,b) fast path (~12-20 % speedup)
hnsw_m None (=16) HNSW connections per node
hnsw_ef_construction None (=150) HNSW build pool size
pq_only False Discard raw F16 vectors after index build — only PQ codes stored. ~98 % storage reduction; reranking disabled; recall@10 ~93-95 %.
ivf_residual False Encode vec − cluster_centroid per IVF cell (residual PQ). Same storage as standard PQ; ~2-4 pp better recall@10.
embedding_model None Embedding model name stored in Iceberg properties (ailake.embedding-model). Used for mismatch detection and migration tracking.
embedding_model_version None Optional model version. Stored as "<name>@<version>" in Iceberg properties.
fts_text_columns None List of text column names to index with Tantivy FTS (e.g. ["chunk_text", "document_title"]). When set, each file gets an AILK_FTS section; search_text() uses O(log N) Tantivy path instead of BM25 brute-force.
embed_fn None Auto-embed callable list[str] → list[list[float]]. When set, insert(texts) and write_batch(texts) can be called without passing embeddings — the callable is invoked automatically.
partition_by None Single-column Iceberg identity partition (e.g. "agent_id"). Stored in metadata.json. Prefer partition_fields for new tables.
partition_value None Per-write value for partition_by. Tagged in key_metadata; used for manifest-level pruning at search time.
partition_fields None Multi-column Iceberg partition spec. List of (column, transform, column_type) tuples. Supports all Iceberg transforms: "identity", "year", "month", "day", "hour", "bucket[N]", "truncate[N]". Takes precedence over partition_by. Example: [("topic_id","identity","int"),("date","month","date")].
format_version 2 Iceberg format version. Set to 3 to write an Iceberg v3 table.

Table

Method Description
insert(texts, embeddings=None, extra_columns=None) → Table Buffer a batch. embeddings: list[list[float]] or numpy array. When embed_fn was set on open_table(), embeddings may be omitted — the callable is invoked automatically. extra_columns: dict[str, list] of additional tabular columns (e.g. id, category) written alongside text/embedding; type per column inferred from its first element (bool/float/int/str).
write_batch_auto_deferred(texts, embeddings=None, extra_columns=None) → Table Deferred write — Parquet persisted immediately (~200k vec/s); index (HNSW or IVF-PQ, auto-selected) built in a background thread. Shard served via flat scan until index ready.
write_batch_idempotent(texts, embeddings, batch_id, extra_columns=None) → Table No-op if batch_id was already committed — safe for retried Airflow tasks / at-least-once pipelines.
write_batch_multi(texts, columns, extra_columns=None) → Table N-column multimodal write — see TableWriter.write_batch_multi below.
write_batch_multi_deferred(texts, columns, extra_columns=None) → Table Deferred variant of write_batch_multi.
commit() → int Persist as a new Iceberg snapshot; returns snapshot ID.
search(query, top_k=10, fetch_data=False, partition_filter=None, score_fn=None, hybrid_text=None, text_column="chunk_text", bm25_weight=0.5, pruning_threshold=None, ef_search=None, rerank_factor=None) → SearchQuery Lazy, chainable search. query: list[float] or numpy array. fetch_data=True returns all Parquet columns + _distance. hybrid_text enables BM25+vector RRF fusion. pruning_threshold skips files whose centroid is farther than this from the query. ef_search overrides the HNSW search pool size. rerank_factor corrects PQ approximation error on IVF-PQ tables by fetching top_k * rerank_factor candidates and reranking with exact distances. Raises ModelMismatch if query dim ≠ table dim.
insert_async(...) Async variant of insert.
write_batch_auto_deferred_async(...) Async variant of write_batch_auto_deferred.
commit_async() → int Async variant of commit.

Table is a context manager: with ailake.open_table(...) as t: ...

In Jupyter, table renders a styled HTML card showing path and vector config.

SearchQuery

Lazy result set — no I/O until materialised.

Method Description
limit(n) → SearchQuery Cap to n nearest neighbours (chainable).
to_list() → list[dict] Always pointer-only: [{"row_id": int, "distance": float, "file": str}, ...]
to_arrow() → pyarrow.Table Full row data (all columns + _distance) when fetch_data=True; pointer-only pyarrow.Table with columns row_id, distance, file otherwise.
to_pandas() → pd.DataFrame Full row DataFrame when fetch_data=True; pointer-only otherwise.
to_polars() → pl.DataFrame Full row DataFrame when fetch_data=True; pointer-only otherwise.
to_list_async() Async variant.
to_arrow_async() Async variant.
to_pandas_async() Async variant.
to_polars_async() Async variant.

In Jupyter, results renders as an HTML table when executed, pending state otherwise. When fetch_data=True, the HTML table shows all Parquet columns.

Full-read mode

# Pointer-only (default — backward-compatible)
df = ailake.search("./my_table", query, top_k=10).to_pandas()
# columns: row_id, distance, file

# Full row data — all Parquet columns + _distance
df = ailake.search("./my_table", query, top_k=10, fetch_data=True).to_pandas()
# columns: text, embedding, ..., _distance

# Same via Table handle
df = table.search(query, top_k=10, fetch_data=True).to_pandas()

fetch_data=True reads each matching Parquet file once and uses arrow_select::take to extract only the matched rows — no full table scan.

search(path, query, top_k=10, fetch_data=False, partition_filter=None, score_fn=None, hybrid_text=None, text_column="chunk_text", bm25_weight=0.5, pruning_threshold=None, ef_search=None, rerank_factor=None) → SearchQuery

Module-level search returning the same chainable SearchQuery.

  • partition_filter — restrict to files with matching partition_value; pruning at manifest level before HNSW I/O.
  • hybrid_text — BM25 query string; when set, retrieves 10×top_k HNSW candidates and fuses via RRF with bm25_weight.
  • pruning_threshold — geometric pruning distance; files whose centroid distance exceeds this are skipped. Default None = no pruning.
  • ef_search — HNSW search pool size. Larger = higher recall, slower. Default None = table default (50).
  • rerank_factor — when set, fetches top_k * rerank_factor HNSW candidates and reranks with exact F32 distances — corrects PQ approximation error on IVF-PQ-indexed tables. Default None = off. Also honored by search_with_data/scan and search_multimodal.
  • score_fn — re-ranking callable (distance: float, row: Any) -> float. Requires fetch_data=True.

VectorColSpec(column, dim, metric="cosine", modality=None, precision="f16", pre_normalize=False, hnsw_m=None, hnsw_ef_construction=None)

Declares one vector column for multi-column writes or searches.

Arg Description Example
column Parquet column name "image_embedding"
dim Embedding dimension 512
metric Distance metric "cosine"
modality Optional tag — stored as ailake.modality-<column> "text" / "image" / "audio" / "video"
precision Per-column storage precision "f16" (default) / "f32" / "i8"
pre_normalize Normalize this column's vectors to unit L2 at write time False (default)
hnsw_m / hnsw_ef_construction Per-column HNSW tuning (None = table/library default) 8 / 100

TableWriter.write_batch_multi(texts, columns, extra_columns=None)

Write a batch with N independent vector columns in one call. Each column gets its own HNSW index in the AILK section of the file footer. extra_columns works the same as on write_batch (e.g. for MultimodalContextSchema fields like media_uri/media_caption). write_batch_multi_deferred(...) is the deferred-index variant.

from ailake import TableWriter, VectorColSpec

text_spec  = VectorColSpec("embedding",       1536, "cosine", "text")
image_spec = VectorColSpec("image_embedding",  512, "cosine", "image")

writer = TableWriter("s3://my-lake/media/", dim=1536, metric="cosine")
writer.write_batch_multi(
    texts,
    [(text_spec, text_embeddings), (image_spec, image_embeddings)],
    extra_columns={"media_uri": media_uris, "media_caption": captions},
)
snapshot_id = writer.commit()

TableWriter.write_batch_ivf_pq(texts, embeddings, extra_columns=None) / write_batch_ivf_pq_deferred(...)

Forces IVF-PQ indexing regardless of write_batch_auto_deferred's hardware/batch-size heuristic — smaller index, better for S3 sequential-scan workloads. The _deferred variant persists Parquet immediately and builds the index in the background.

search_multimodal(path, queries, top_k=10, ef_search=None, pruning_threshold=None, rerank_factor=None) → list[dict]

Cross-modal search: fuse results from N vector columns via Reciprocal Rank Fusion.

rrf_score = Σ weight_i / (60 + rank_i) — higher is better.

results = ailake.search_multimodal(
    "s3://my-lake/media/",
    queries=[
        ("embedding",       text_vec,  0.7),   # 70% weight on text similarity
        ("image_embedding", image_vec, 0.3),   # 30% weight on image similarity
    ],
    top_k=20,
)
# Returns: [{"row_id": int, "rrf_score": float, "file": str}, ...]
# Ordered by descending rrf_score

Each column is searched by its own HNSW. Per-column dimensions are auto-detected from ailake.dim-<col> Iceberg properties written at commit() time — no dim argument needed when reading tables written with write_batch_multi.

Agent(table_path, embed_fn, agent_id=None) — Phase 9 episodic memory

High-level helper for agent frameworks (LangChain, CrewAI, AutoGen). Wraps TableWriter + search + ContextAssembler with hybrid scoring (distance × recency × importance) and automatic per-agent partition isolation. Metadata (agent_id, session_id, mem_type, importance, created_at, last_accessed_at, tool_name, outcome, ...) is written as real typed columns — the table stays queryable by any AI-Lake client (Spark/Trino/Flink/DuckDB/CLI), and ailake.decay_memories(table_path) works against it directly (it reads the real last_accessed_at Timestamp column, not a JSON-packed string).

import ailake

agent = ailake.Agent(
    table_path="s3://my-lake/agents/",
    embed_fn=my_embed_fn,         # list[str] → list[list[float]]
    agent_id="agent-uuid-here",   # isolates reads/writes to this agent's shard
)

# Store a memory with optional importance score
agent.remember("Deployment failed due to OOM on Tuesday", importance=0.9)

# Recall relevant memories — hybrid score = distance × recency × importance
results = agent.recall("deployment issues", top_k=5)

# Log a tool call for later retrieval
agent.log_tool_call(
    name="web_search",
    input={"q": "python asyncio timeout"},
    output={"hits": 5},
    outcome="success",
    latency_ms=120,
)

# Assemble context for LLM prompt (dedup + token budget)
context_xml = agent.assemble_context("why did deployment fail?", max_tokens=4096)
Method Description
remember(text, importance=1.0) Embeds text and stores it as an EpisodicMemorySchema row tagged with agent_id.
recall(query, top_k=5) Embeds query, searches with partition_filter=self.agent_id, applies hybrid score.
log_tool_call(name, input, output, outcome="success", latency_ms=0) Stores a ToolCallSchema row — searchable by tool name and context.
assemble_context(query, max_tokens=4096) recall() + ContextAssembler — returns prompt-ready XML.

migrate_embeddings(path, old_column, new_column, embed_fn, *, ...)

Re-embeds all chunks in a table with a new model, committing the result as a new Iceberg snapshot.

ailake.migrate_embeddings(
    path         = "s3://my-lake/docs/",
    old_column   = "embedding",        # existing vector column
    new_column   = "embedding_v2",     # destination column (may be same name)
    embed_fn     = my_embed_fn,        # callable: list[str] → list[list[float]]
    text_column  = "chunk_text",       # source text column
    strategy     = "dual_write_then_cutover",  # or "atomic_replace"
    batch_size   = 512,
    new_model    = "text-embedding-3-large",
    new_model_version = "v1",
    on_progress  = lambda *, files_done, files_total, rows_migrated: print(
        f"{files_done}/{files_total} files, {rows_migrated} rows"
    ),
)
Parameter Default Description
path required Table root URI
old_column required Existing vector column to migrate from
new_column required Destination vector column
embed_fn required list[str] → list[list[float]] callable
text_column "chunk_text" Parquet column containing the source text
strategy "dual_write_then_cutover" "dual_write_then_cutover" (zero downtime, 2× peak storage) or "atomic_replace" (lower storage, brief mixed-model window)
batch_size 512 Rows passed to embed_fn per call
new_model None Model name written to ailake.embedding-model after migration
new_model_version None Optional version suffix
on_progress None Callable invoked after each file with keyword args files_done, files_total, rows_migrated

TableWriter (low-level — use open_table() for most cases)

# Standard HNSW write with model tracking
writer = ailake.TableWriter(
    path, dim=1536, metric="cosine",
    embedding_model="text-embedding-3-small",
    embedding_model_version="v1",
)
writer.write_batch(texts, embeddings)
snapshot_id = writer.commit()

# Pattern B — auto-embed: omit embeddings, SDK calls embed_fn
writer = ailake.TableWriter(
    path, dim=1536,
    embed_fn=lambda texts: my_model.encode(texts).tolist(),
)
writer.write_batch(texts)  # no embeddings arg needed
writer.commit()

# PQ-only — raw vectors discarded after index build (~98 % storage reduction)
writer = ailake.TableWriter(path, dim=1536, metric="cosine", pq_only=True)
writer.write_batch(texts, embeddings)
writer.commit()

# Residual PQ — per-cluster encoding for better recall
writer = ailake.TableWriter(path, dim=1536, metric="cosine", ivf_residual=True)
writer.write_batch(texts, embeddings)
writer.commit()

# Deferred write — Parquet immediate, index background (~200k vec/s)
writer = ailake.TableWriter(path, dim=1536, metric="cosine")
writer.write_batch_auto_deferred(texts, embeddings)
writer.commit()

TableWriter parameters: same as open_table() (includes pq_only, ivf_residual, pre_normalize, hnsw_m, hnsw_ef_construction, embedding_model, embedding_model_version, embed_fn, partition_by, partition_value, partition_fields, format_version).

delete_where(path, column, values) → None

Commits an Iceberg equality delete. No data files are rewritten.

ailake.delete_where("./my_table", "id", ["doc-obsolete-1", "doc-obsolete-2"])

add_column(path, name, col_type, *, required=False, initial_default=None) → int

Adds column to live table schema. Returns new schema_id. No data files rewritten.

ailake.add_column("./my_table", "source_url", "string", required=False, initial_default="")

rename_column(path, old_name, new_name) → int

Renames column. Returns new schema_id.

hardware_info() → dict[str, str]

Returns hardware profile of current machine.

info = ailake.hardware_info()
# {
#   "backend":           "cpu-simd",   # or "nvidia-cuda" / "amd-rocm"
#   "has_cuda":          "false",
#   "has_rocm":          "false",
#   "cpu_logical_cores": "16",
#   "has_avx2":          "true",
#   "has_avx512":        "false",
#   "recommend_ivf_pq":  "true",       # true when has GPU OR (cores > 8 AND n >= 5000)
# }

Call before write_batch_auto_deferred to understand what index type will be selected.

compact(path, *, min_files=4, target_size_bytes=536870912, max_files_per_pass=20, deferred=False) → dict

Native binding — calls ailake_query::compaction directly (no external ailake CLI binary required). Merges small files into a larger file and rebuilds the HNSW/IVF-PQ index. Returns {"ok": True, "files_compacted": N, "output_path": str | None}. No-op when fewer than min_files qualify.

result = ailake.compact("s3://my-lake/docs/", min_files=5)
# {"ok": True, "files_compacted": 1, "output_path": "data/compacted-..."}

estimate(rows, dim, hnsw_m=16, pq_m=None) → list[dict]

Pure-math storage estimate (no I/O) across 6 precision modes (F32/F16/I8, with/without IVF-PQ, PQ-only). Mirrors ailake estimate's CLI output exactly.

for row in ailake.estimate(rows=1_000_000, dim=1536):
    print(row["mode"], row["total_bytes"], row["recall"])

add_vector_column(table_path, column, dim, metric="cosine", precision="f16", pre_normalize=False, hnsw_m=None, hnsw_ef_construction=None) → int

Adds a new vector column to an existing table's schema without rewriting data files. Old files return null for this column until backfill_vector_column runs. Returns the new schema-id.

backfill_vector_column(table_path, column, embed_fn, text_column="chunk_text", batch_size=512) → None

Backfills a column added via add_vector_column across all existing files by embedding text_column. Idempotent — files that already have the column are skipped.

evolve_schema(path, *, add_columns=None, rename_columns=None) → int

Applies schema evolution in a single metadata-only call (no data files rewritten). Combines add_column + rename_column in order. Returns final schema_id.

ailake.evolve_schema(
    "s3://my-lake/docs/",
    add_columns=[{"name": "score", "type": "float", "initial_default": 0.0}],
    rename_columns=[{"from": "old_text", "to": "chunk_text"}],
)

now_ns() → int

Returns current Unix epoch time in nanoseconds. Use to populate created_at / last_accessed_at columns (Arrow Timestamp(ns, UTC)).

ts = ailake.now_ns()   # e.g. 1750000000000000000

delete_rows(path, file_path, row_ids) → None

Low-level Rust binding: physically removes rows from a specific Parquet file within the table, rebuilding the HNSW index. For logical Iceberg deletes (no file rewrite), use delete_where instead.

search_text(path, query_text, top_k=10, text_columns=None) → list[dict]

Pure BM25 full-text search — no HNSW required. O(N) brute-force scan; uses Tantivy O(log N) fast path for files that have a Tantivy FTS index embedded (written with fts_text_columns=).

# BM25 search (no embedding needed)
hits = ailake.search_text("s3://my-lake/docs/", "rust async programming", top_k=10)
# Returns: [{"row_id": int, "score": float, "file": str}]  (score: higher = more relevant)

# Restrict to specific text columns (default: ["chunk_text"])
hits = ailake.search_text(path, "query", text_columns=["chunk_text", "document_title"])

scan(path, query, top_k=10, ...) → bytes

Alias for search_with_data — same capability as ailake-go's Scan() and ailake-jni's ailake_scan_json (search + full-row fetch in one call, no JOIN needed against a separately-registered table). See search_with_data below.

assemble_context(chunks, max_tokens=4096, dedup_threshold=0.05, group_by_document=True, max_chunks_per_document=10) → dict

Assembles chunk dicts into structured XML for LLM input. Returns {"text": str, "chunk_count": int, "token_estimate": int} (previously returned a bare string). Deduplicates near-identical chunks within the token budget — pass an "embedding": list[float] key per chunk to enable cosine-distance dedup; chunks without it are never deduplicated.

ctx = ailake.assemble_context(chunks, max_tokens=2048)
print(ctx["text"])         # XML ready for LLM input
print(ctx["chunk_count"])  # how many chunks made it in

Storage modes and index types

Mode pq_only ivf_residual Storage (dim=1536, 1M rows) Reranking Recall@10
HNSW + F16 raw (default) False False ~300 GB vectors + ~30 GB HNSW Yes (exact) ~97 %
IVF-PQ + F16 raw False False ~300 GB + ~5 GB PQ codes Yes (exact) ~93 % inline
IVF-PQ residual + raw False True ~300 GB + ~5 GB Yes (exact) ~96 %
PQ-only True False ~5 GB total No ~93-95 %
PQ-only residual True True ~5 GB total No ~94-96 %
# Deferred write — all modes, instant Parquet commit, index in background
writer = ailake.TableWriter(path, dim=1536, pq_only=True, ivf_residual=True)
writer.write_batch_auto_deferred(texts, embeddings)
writer.commit()

HNSW tuning guide

Goal hnsw_m hnsw_ef_construction
Low latency / high QPS 8 100
General purpose (default) 16 150
High recall (RAG) 24 200
Max recall (medical, legal) 32 400

Type checking

Ships py.typed (PEP 561) and ailake/_ailake.pyi stubs. mypy and pyright work out of the box with no configuration.

Iceberg compatibility

Tables are valid Apache Iceberg Spec v2. Spark, Trino, DuckDB, and PyIceberg read tabular columns normally; the HNSW index lives in an extension section that standard Parquet readers silently ignore.

License

MIT OR Apache-2.0

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