Compute a consensus dataseries with FAMSA algorithm.
Project description
Albion Similog
This project is dedicated to the generation of possible edges within the Albion framework, through the way of FAMSA algorithm.
albion_similog
works with Python3.8.
Installation
Dependencies
This package works with a few dependencies from the biology ecosystem, like biopython
or
scikit-bio
. They are installable easily through pip
.
There is a notable exception with FAMSA
, that should be patched for specific Albion purpose, and
compiled. Everything is managed through the Makefile
.
Debian/Ubuntu
$ virtualenv .venv
$ source .venv/bin/activate
(.venv) $ make install
Windows
TODO
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
albion_similog-0.2.0.tar.gz
(10.4 kB
view hashes)
Built Distribution
Close
Hashes for albion_similog-0.2.0-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | 8cd46d19dbb78815fa6f798938ec33279c74923137703b74ef97b52209094b9c |
|
MD5 | cbc08c796d1ea531bf43446ffe5be5f5 |
|
BLAKE2b-256 | 18932714e9a673922250b7caade2bb5457d4633317e0dc69af5f65f713d4fcd9 |