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ARPES viewer

DOI PyPI version User Guide Local Agent Settings

Version 1.3.3 (last modified 10 November 2026) -- what changed is in CHANGELOG.md. For non-commercial use only; see the terms of use.

A Python/PyQt5 program for ARPES data: browse the measurements of a beamtime, open them in their own windows, convert to momentum, cut, fit, process, compare with a band-structure calculation, and lay the results out as a publication figure.

A note from the author on AI agents. Talking with beamline users, I heard two concerns again and again: running an AI agent on local data is unfamiliar, and the data might end up with an AI company and be used for training. The AI assistant panel (top of the tool panel) is my answer to the first. Choose the data folder and the results folder, tick a few options, and it writes the prompt to paste into your AI app. No configuration and no manual to read first. Every step the agent runs is listed with its code and output, a status light shows its state, and Pause hands the controls back to you at any time (how it works). On the second concern: the raw data files stay on your computer and are processed there. What the agent reads is sent to the AI provider as part of the conversation: printed results, fitted values, and the pictures it inspects to judge a step. Whether that is used for training depends on your provider and your account settings, so check them. Keep private code out of any folder the agent can reach. In my view, AI in ARPES experiments and analysis is here to stay. An experiment update prepared by the agent, which you check step by step, is a low-risk way to get familiar with it.


What it does

  • Reads SOLEIL ANTARES and CASSIOPEE, ALS MAESTRO, ALBA LOREA, Diamond I05 and I05-1, MAX IV Bloch, Elettra APE, BESSY One Cube / One Square, SOLARIS URANOS, ASTRID2 SGM4, and its own saved format (loading data).
  • Shows cuts, Fermi-surface maps, photon-energy scans, spatially resolved scans and spin-resolved curves, each in its own window with linked cursors (the viewers).
  • Converts maps and cuts to momentum, photon-energy scans to k_z, with the Brillouin zone drawn over them (§4.8, §4.9–4.10, §4.11).
  • Analyses: Fermi-edge fits, Fermi-surface correction, MDC / EDC fits and the self-energy, ridge detection, curvature, second derivatives and the minimum gradient, dichroism, core levels, spin, de-gridding, detector corrections, and the Fermi pockets of quasi-two-dimensional samples (under test) (Parts 3–5).
  • Compares with theory: crystal structures, tight-binding fits, and calculated bands from Wien2k, VASP, Quantum ESPRESSO, Wannier90 and the FPLO + Wannier tools -- along a path, as constant-energy contours on any (hkl) plane, or as a 3-D Fermi surface (§6.2–6.5).
  • Makes figures: the figure composer, laid out like a manuscript page, exported as PNG, PDF or SVG, and saved with its data (§6.1, 6.6).
  • Loses nothing: every derived dataset is autosaved, a crash is recovered from, and long steps show a progress bar (§8.1).

Installing and starting

Needs Python 3.9+. With pip, which installs PyQt5, pyqtgraph, numpy, h5py and scipy with it:

pip install arpes-viewer
arpes-viewer

(python -m arpes_viewer does the same; for the latest, unreleased version: pip install git+https://github.com/DingPei1995/ARPES-viewer.)

From a downloaded copy of this repository, with those packages installed:

python ARPES_viewer.py
  • Windows: double-click ARPES viewer.pyw in this folder: no console window to close by mistake (the output goes to ~/.arpes_viewer/launcher.log).
  • macOS: double-click ARPES viewer.app in this folder. It finds a Python that has the packages (conda included), remembers it, and says what to install if none has. The first time, if macOS calls it an app from an unidentified developer: System Settings → Privacy & Security → Open Anyway.
  • No beamtime at hand? python devtools/demo_data.py writes the synthetic demo data of the example figures below to demo_data/ (trying it with demo data).

From raw data to a publication figure

Example figure 1: a notched cube, measured and calculated constant-energy contours, stacked contours

These are not real experimental data. Every panel above is made from the program's synthetic demo data (devtools/demo_data.py): an invented tight-binding toy model -- a triangular lattice, a = 3.3 Å, stacked with c = 6 Å, a few bands with orbital labels and a k_z dispersion -- turned into spectra with a Fermi-Dirac cut-off, the analyser resolution and Poisson counting noise, and written as beamline files. The "calculation" in panel (b) is the same toy Hamiltonian made deliberately 1/0.8 times wider and 50 meV higher, so that comparing it with the "measurement" has something to find. No published data or literature were used to generate them: the model and its parameters are invented, and names such as "Se-pxy" or "1T-TiSe₂-like" are labels for the toy, not a description of a real material. (The only tabulated values in the demo set are the X-ray line energies of its synthetic EDS spectrum, standard emission energies as listed in the X-ray Data Booklet; that spectrum is not part of this figure.)

Example figure 1 in the figure composer, its colour bar being set

The main panel: the beamtime's datasets and the tools for the selected ones A Fermi-surface map converted to momentum, in its viewer

Example figure 1 in the figure composer (top); the main panel and a Fermi-surface map in momentum, in its viewer (bottom) -- also on the synthetic demo data.

Every step from the files to the finished figure is the program's own, and every step is plain Python that a script -- or an AI agent -- can run, without a screen:

Step In the program In code
1. Raw data the beamline files, as the main panel lists them arpes_viewer.loader.registry.load(path, entry)
2. To momentum the Γ-plane Fermi-surface map → k-map arpes_viewer.tools.momentum.kspace.convert_map(...)
3. The calculation Calculated bands: a Wannier Hamiltonian; Z and the shift fitted on a cut BandsDialog.open_file(...), .fit_alignment()
4. Measured vs calculated constant-energy maps over the calculated contours, coloured by orbital weight (b) BandsDialog.series_panels(...)
5. 3-D views the notched cube (a), the stacked contours (c) VolumeWindow(...).figure_panel()
6. The figure the figure composer: arranged, lettered, exported as PNG / PDF, saved as .afig with the data and the files it came from FigureWindow(...), .arrange(...), .write(...)

devtools/figure_tests.py is exactly this script -- it writes the demo files, reads them back, and builds this figure (and its companion, example figure 2) in under a minute:

python devtools/figure_tests.py out_png/ out_afig/

In the step 3 fit it recovers what was built into the demo calculation (Z = 0.798 ± 0.001 and a shift of −49.8 ± 0.4 meV, against 0.8 and −50 meV).


An AI agent can drive it

Talk to your AI app (the Claude desktop app, Claude Code, any agent that can read and write files) in plain words -- "today I process the kz maps in this folder: align the Fermi levels, convert to momentum with Γ at 80 eV, draw the zone, and make a slice-series figure" -- and it drives the program on your screen, step by step, while you watch and can take over. Data stay on your computer.

  • Start: press AI assistant... (top of the tool panel), choose the data and results folders, tick what you want (step by step, a usage log, a report, slides, hiding the sample's identity ...), and press Copy the prompt and start; paste the prompt into your AI app. The window then lists each step the agent runs, and Pause hands you the controls. The agent reads arpes_viewer/agent/API.md, the program's ~50 documented operations (L.fermi_edge, L.kz_to_k, L.bz_overlay, L.slice_series, L.figure_render ...), instead of the source.
  • Other routes: an MCP app (arpes-viewer-mcp; with the program started as arpes-viewer --agent-bridge it calls the same operations), or a coding agent writing a script to keep, on the headless workspace and the Qt-free computations in arpes_viewer/tools/.

Starting and watching an agent from the AI assistant panel

The AI assistant button at the top of the tool panel, lit green while an agent works

  1. Open it. Press AI assistant... at the top of the main panel's tool column (above). The button is also the agent's status light, whether the window is open or not: grey not running, green running, yellow paused (you work by hand), red a failed step.

The AI assistant window before starting: the folders, the options, the request in one's own words

  1. Set it up (left column):
    • 1. Folders: the data folder (read only for the agent) and a results folder (everything it writes goes there; its commands go in <results>/_agent).
    • 2. What you want: ask before each physical parameter (Γ, an energy window, V0 ...), step by step with your go-ahead, a usage log, a report, slides, hiding the sample's identity, a tidy list -- and your request in your own words.
    • 3. Your AI app: works in folders (the Claude desktop app, Claude Code, any agent that reads and writes files -- nothing to install) or uses MCP tools.
  2. Start. Press Copy the prompt and start and paste the prompt into your AI app. The prompt tells the agent where the folders are, where the program's reference (arpes_viewer/agent/API.md) is, and the working rules (fit E_F on raw data per row, report files left out, ask before going around an operation, keep the list tidy ...); Show the prompt shows it in full.

The AI assistant window while the agent works: its steps, each with what it printed

  1. Watch and step in (right column). Each step the agent runs appears in the list with ✓ or ✗ (red); click one to see what it printed -- here the Fermi-edge search and fit of a map. Its results appear as new rows in the main list (never overwriting anything), its pictures and figures in the results folder. Pause the agent holds its next commands while you work by hand (the light turns yellow); Resume lets them through. Closing the window does not stop the agent.
  2. Your screens stay yours. Windows the agent opens only to drive them (a conversion dialog, a temporary slice series) never appear; the ones it leaves open -- a finished figure, a viewer, a tool waiting for your input -- open on the screen of the main panel, not on the screen you are working on.

The step-by-step guide is agentic/README.md, with requests to copy in agentic/PROMPTS.md; a real session by Sonnet 5.5 is in Reports/.

As with any analysis, check what an agent produced before you publish it.


Bug reports

The program saves what went wrong by itself, in error_logs/errors_<date>_<time>.txt in its folder (in ~/.arpes_viewer/ when installed with pip), and keeps running. With a bug report on GitHub Issues, upload that file (drag it into the text box) or paste its text -- the main panel's foot has Copy the newest error log and Open the error logs -- and give the version number, shown in the main window's title bar.


Documentation


Terms of use, citation and licence

Terms of use. This program is for non-commercial use only (academic research and teaching); any commercial use is not permitted. New and updated loaders cover data from public large-scale facilities (synchrotrons and similar user facilities), formats of individual laboratories' own set-ups can be added by the user him/herself. If you use this program for a paper on ARPES experiments, please cite it in its references: Ding Pei, ARPES viewer, Zenodo, https://doi.org/10.5281/zenodo.23771647 (GitHub's Cite this repository gives the reference in other formats). If you write a paper related to AI that uses this program or its code, please discuss it with the author by e-mail first. For collaborations, or questions about the details, contact ding.pei@synchrotron-soleil.fr.

Licence and authorship. Copyright (c) 2026 Ding Pei. Licensed under the PolyForm Noncommercial License 1.0.0; see also NOTICE. This is the author's personal work, developed from the author's own earlier code; no institution funded it. Some of its ideas were inspired by the ARPES data-processing programs of the author's former group, the Chen Group at the University of Oxford. The requirements, design decisions, trade-offs, physics, the testing on real experimental data and the feedback from it (drawing on Phys. Rev. B 103, 245121 (2021) and Phys. Rev. B 95, 125126 (2017)), and the review and acceptance of every change are Ding Pei's; the implementation was assisted by Claude (Anthropic), credited as co-author in the commits.

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