A simple tool to filter references from a BAM file using different filter types

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License: GNUv3

Author: Antonio Fernandez-Guerra

Tags bam-filter

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Meta

  
  
License: GNUv3

  
  
    
Author: Antonio Fernandez-Guerra

  
  
  
  

    
    Tags
    
    
      bam-filter
    
    
  

  
  






  
  
    
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            genomewalker
          
        
      
    
  






  
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                This version
                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.28
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.27
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.26
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.25
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.24
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.23
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.22
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.21
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.20
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.19
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.18
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.17
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.16
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.15
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.14
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.13
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.12
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.11
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.10
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.9
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.8
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.7
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.6
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.5
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.4
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.2
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.1
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.1.0
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.18
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.17
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.16
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.15
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.14
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.13
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.12
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.11
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.10
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.9
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.8
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.7
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.5
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.4
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.3
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.2
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.1
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  1.0.0
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.25
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.24
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.23
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.22
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.21
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.20
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.19
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.18
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.17
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.16
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.15
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.14
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.13
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.12
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.11
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.10
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.9
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.8
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.6
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.5
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.4
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.3
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.2
                  
                  
                

                

                  
                

              
            

            
            
            

              

                
              


              

                
                

                
                
                
                
              


              
                

                  0.0.1
                  
                  
                

                

                  
                

              
            

            
          

        


        
          
          

            
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