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Project description
BaseBio
This is a Python package for bioinformatics.
Table of Contents
Overview
BaseBio is a Python package for bioinformatics. It provides a set of modules for running any shell command with a common function and recode of the original program monitor code in postgreSQL.
Requirements
- Python 3.8+
- Python modules:
- typer (>=0.15.2,<0.16.0)
- sqlalchemy (>=2.0.40,<3.0.0)
- retrying (>=1.3.4,<2.0.0)
nanoMD modules
basebio includes the following sub-modules:
- cmd
- db
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