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bdtools

Toolkit for reccuring tasks

Index

Installation

Pease select your operating system

Windows

Step 1: Download this GitHub Repository

  • Click on the green <> Code button and download ZIP
  • Unzip the downloaded file to a desired location

Step 2: Install Miniforge (Minimal Conda installer)

  • Download and install Miniforge for your operating system
  • Run the downloaded .exe file
    • Select "Add Miniforge3 to PATH environment variable"

Step 3: Setup Conda

  • Open the newly installed Miniforge Prompt
  • Move to the downloaded GitHub repository
  • Run one of the following command:
# TensorFlow with GPU support
mamba env create -f environment_tf-gpu.yml
# TensorFlow with no GPU support 
mamba env create -f environment_tf-nogpu.yml
  • Activate Conda environment:
conda activate bdtools

Your prompt should now start with (bdtools) instead of (base)

MacOS

Step 1: Download this GitHub Repository

  • Click on the green <> Code button and download ZIP
  • Unzip the downloaded file to a desired location

Step 2: Install Miniforge (Minimal Conda installer)

  • Download and install Miniforge for your operating system
  • Open your terminal
  • Move to the directory containing the Miniforge installer
  • Run one of the following command:
# Intel-Series
bash Miniforge3-MacOSX-x86_64.sh
# M-Series
bash Miniforge3-MacOSX-arm64.sh

Step 3: Setup Conda

  • Re-open your terminal
  • Move to the downloaded GitHub repository
  • Run one of the following command:
# TensorFlow with GPU support
mamba env create -f environment_tf-gpu.yml
# TensorFlow with no GPU support 
mamba env create -f environment_tf-nogpu.yml
  • Activate Conda environment:
conda activate bdtools

Your prompt should now start with (bdtools) instead of (base)

Comments

  • Input data are modified when using get_edt with the following parameters (and maybe others):
    • get_edt(regions, target="foreground", normalize="object")

Metadata

Release files for bd-tools 0.3.17

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bd-tools 0.3.17
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bd_tools-0.3.17.tar.gz 45.4 kB Details

Built distribution (wheel)

Table of built distributions (wheels) for bd-tools 0.3.17
File Interpreter ABI Platform
bd_tools-0.3.17-py3-none-any.whl Python 3 none any Details

Total release size: 101.0 kB

Release files / bd_tools-0.3.17.tar.gz

Download URL bd_tools-0.3.17.tar.gz
Size 45.4 kB
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Release files / bd_tools-0.3.17-py3-none-any.whl

Download URL bd_tools-0.3.17-py3-none-any.whl
Size 55.6 kB
Tags Python 3
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Uploaded via twine/6.1.0 CPython/3.10.16

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0.3.17 This release

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0.3.14

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0.3.13

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0.3.12

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0.3.11

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0.3.10

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0.3.9

2 release files

0.3.8

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0.3.7

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0.3.6

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0.3.5

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0.3.4

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0.3.3

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0.3.1

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0.3.0

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0.2.3

2 release files

0.2.2

2 release files

0.2.1

2 release files

0.2.0

2 release files

0.1.0

2 release files

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