FastA reader
Very simple fastA reader.
from bfasta import FastAreader
reader = FastAreader("myFile.fa")
# If you want to just read the first entry:
header, seq = next(reader.readFasta())
# Read all the entries
# If you want to read all the entries
for header, seq in reader.readFasta():
# header and seq are now strings here
print(header)
Originally by Dr. B.
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
bfasta-0.1.1.tar.gz
(2.5 kB
view details)
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file bfasta-0.1.1.tar.gz.
File metadata
- Download URL: bfasta-0.1.1.tar.gz
- Upload date:
- Size: 2.5 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via:
poetry/1.3.2 CPython/3.9.11 Darwin/22.3.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
28f49b147657978b7eea1c38199b65a06cf4dbfb4d5aa4c4a52f4ad999b34b4e
|
|
| MD5 |
b081a16fbcd5712701247f0422971315
|
|
| BLAKE2b-256 |
1e42fa229123df0745e8c7f56c22bc62ccac433da28475eb57e80a65177d1105
|
File details
Details for the file bfasta-0.1.1-py2.py3-none-any.whl.
File metadata
- Download URL: bfasta-0.1.1-py2.py3-none-any.whl
- Upload date:
- Size: 3.0 kB
- Tags: Python 2, Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via:
poetry/1.3.2 CPython/3.9.11 Darwin/22.3.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
8769647f5322570a9fb36263295c2a23e3ec56cef953647f443cdef3fa159f1c
|
|
| MD5 |
3769dbe3d4c266204ef16e6e1f353090
|
|
| BLAKE2b-256 |
2d3d6f53bca321a234ffabdb9dcc09c317094c1a3569f1a193ceb148ffe4a4a6
|