Skip to main content

bifrost_bridge

bifrost_bridge converts outputs from multiple bioinformatics QC tools into normalized TSV files and can combine them into a single QC table.

Development

python3 -m venv .venv
source .venv/bin/activate
pip install -e .[dev]
pytest

CLI

Installed commands:

  • bridge_mlst
  • bridge_fastp
  • bridge_quast
  • bridge_plasmidfinder
  • bridge_amrfinderplus
  • bridge_bracken
  • bridge_pmlst
  • bridge_rmlst
  • bridge_shovill
  • bridge_ssiamb
  • bridge_qc

Use --help on each command for arguments.

Metadata

Release files for bifrost-bridge 0.9.2

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for bifrost-bridge 0.9.2
File Size Uploaded Provenance Actions
bifrost_bridge-0.9.2.tar.gz 157.9 kB With provenance Details for bifrost_bridge-0.9.2.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for bifrost-bridge 0.9.2
File Interpreter ABI Platform Actions
bifrost_bridge-0.9.2-py3-none-any.whl Python 3 none any Details for bifrost_bridge-0.9.2-py3-none-any.whl

Total release size: 175.7 kB

Release files / bifrost_bridge-0.9.2.tar.gz

Download URL bifrost_bridge-0.9.2.tar.gz
Size 157.9 kB
Tags Source
SHA-256 checksum
How to use checksums
2bd9eb2b81acd1390fb4dbd25af6aef76c8476d3a7bae11b5ac5bd17f1b320e1
BLAKE2b-256 checksum
How to use checksums
4ea6a06160d625c62fe4fd24c2e7156fc85cdfe64df609d1da4f2516a68476e8
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
Yes
Uploaded via twine/6.1.0 CPython/3.13.13

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Jul 30, 2026.

Transparency log

Release files / bifrost_bridge-0.9.2-py3-none-any.whl

Download URL bifrost_bridge-0.9.2-py3-none-any.whl
Size 17.8 kB
Tags Python 3
SHA-256 checksum
How to use checksums
b8161c7ee015d0cf3fc211c2a1561c2ad201b93c63afce44f0ecb1be6299a8e3
BLAKE2b-256 checksum
How to use checksums
f865672ae24f7a1a4a88d3ebe31ff3d956d454361e8e46d55aa9b81c970e981f
Upload date
Uploaded using Trusted Publishing?
What is trusted publishing?
Yes
Uploaded via twine/6.1.0 CPython/3.13.13

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Jul 30, 2026.

Transparency log

Security for bifrost-bridge 0.9.2

Provenance

Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.

Full provenance

All 2 files in this release have been uploaded with provenance metadata.

Select from 2 files

Attestation for bifrost_bridge-0.9.2.tar.gz

PyPI Publish Attestation

PyPI verified that this artifact, at this checksum, originated from the publisher listed below.

Signed by GitHub Actions, verified by PyPI on Jul 30, 2026.

Transparency log

A note on package security

PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.

To learn more about protecting yourself from malicious actors, visit our package security documentation.

Anthropic, PBC Visionary sponsor Bloomberg Visionary sponsor Hudson River Trading Visionary sponsor Meta Visionary sponsor NVIDIA Visionary sponsor Microsoft Sustainability sponsor Depot Continuous Integration AWS Cloud computing and Security Sponsor Datadog Monitoring Fastly CDN Google Download Analytics Sentry Error logging StatusPage Status page