Skip to main content

Downloader, parser, and BEL converter for FamPlex

Project description

Protein complex and family hierarchies from FamPlex.

Installation Current version on PyPI Stable Supported Python Versions MIT License

bio2bel_famplex can be installed easily from PyPI with the following code in your favorite terminal:

$ python3 -m pip install bio2bel_famplex

or from the latest code on GitHub with:

$ python3 -m pip install git+https://github.com/bio2bel/famplex.git

Setup

FamPlex can be downloaded and populated from either the Python REPL or the automatically installed command line utility.

Python REPL

>>> import bio2bel_famplex
>>> famplex_manager = bio2bel_famplex.Manager()
>>> graph = famplex_manager.to_bel()

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

bio2bel_famplex-0.0.1.tar.gz (10.7 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

bio2bel_famplex-0.0.1-py36-none-any.whl (7.9 kB view details)

Uploaded Python 3.6

File details

Details for the file bio2bel_famplex-0.0.1.tar.gz.

File metadata

  • Download URL: bio2bel_famplex-0.0.1.tar.gz
  • Upload date:
  • Size: 10.7 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.20.1 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.7.0

File hashes

Hashes for bio2bel_famplex-0.0.1.tar.gz
Algorithm Hash digest
SHA256 cc78cbeb5b665767d6f7827c1f7ab9d9076a839626619b9e064e1e5afb4d545c
MD5 c230bef29991e5c54f97f492e62cc1d3
BLAKE2b-256 fd3300c1234e9738bb369861ac6bea708cc91d8af3a20d596dff46625eb046f7

See more details on using hashes here.

File details

Details for the file bio2bel_famplex-0.0.1-py36-none-any.whl.

File metadata

  • Download URL: bio2bel_famplex-0.0.1-py36-none-any.whl
  • Upload date:
  • Size: 7.9 kB
  • Tags: Python 3.6
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.20.1 setuptools/40.6.2 requests-toolbelt/0.8.0 tqdm/4.28.1 CPython/3.7.0

File hashes

Hashes for bio2bel_famplex-0.0.1-py36-none-any.whl
Algorithm Hash digest
SHA256 0ed269340d62509ae85c2b8b514f24f217b36e236abc875e37d4409e33f695e3
MD5 c774e71ac05476e9a5719c798cd63a5d
BLAKE2b-256 78605b9b85bbe88e4730f2595cc45e0f1e61d9c9f8d868b40b68354723534828

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page