A package for converting GO to BEL
Project description
Converts the Gene Ontology (GO) to BEL
Installation

bio2bel_go can be installed easily from PyPI with the following code in your favorite terminal:
$ python3 -m pip install bio2bel_go
or from the latest code on GitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/go.git@master
Setup
GO can be downloaded and populated from either the Python REPL or the automatically installed command line utility.
Python REPL
>>> import bio2bel_go
>>> go_manager = bio2bel_go.Manager()
>>> go_manager.populate()
Command Line Utility
bio2bel_go populate
Citation
Ashburner, M., et al. (2000). Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics, 25(1), 25–9.
Links
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file bio2bel_go-0.0.1.tar.gz.
File metadata
- Download URL: bio2bel_go-0.0.1.tar.gz
- Upload date:
- Size: 14.6 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.19.1 setuptools/40.4.3 requests-toolbelt/0.8.0 tqdm/4.26.0 CPython/3.7.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
709ba89478a8350518046b84470a5ef3bb7f1729e9b577f9aa3015a641cafd17
|
|
| MD5 |
4191f48c27951421288e0ac188bdfc19
|
|
| BLAKE2b-256 |
a4cf74e2bb897534e004922a6f9b93cb358779e84c37397d515168a60114b1ed
|
File details
Details for the file bio2bel_go-0.0.1-py3-none-any.whl.
File metadata
- Download URL: bio2bel_go-0.0.1-py3-none-any.whl
- Upload date:
- Size: 10.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.12.1 pkginfo/1.4.2 requests/2.19.1 setuptools/40.4.3 requests-toolbelt/0.8.0 tqdm/4.26.0 CPython/3.7.0
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
43a15e8248292cbbb41540a582a5f52c31d55a4e438f0d7fe69a217daa60a01e
|
|
| MD5 |
318e54b8e8260e8b19407b3b2cbc47fa
|
|
| BLAKE2b-256 |
f9c2977ecd3cca8e3a2e1752b098a05303391429212714211dd9104123c57cb2
|