Bioleaching microbial community
Project description
bioleach-balrog
An alternate version of bioleach that uses the machine-learning based method balrog for gene prediction
installation
conda create -n bioleach -c conda-forge -c bioconda \
pandas seaborn biopython sra-tools pysradb \
mysql-connector-python sqlalchemy fastp kraken2 bowtie2 \
megahit prodigal numpy=2.3 pytorch mmseqs2 balrog
pip install bioleach-balrog
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