Collection of bioinformatics tools related to alignments and phylogenetic trees
Project description
biotree_tools
Collection of bioinformatics tools related to alignments and phylogenetic trees
Installation
conda install -c mmariotti -c bioconda -c etetoolkit biotree_tools
Tools
- alignment_tools utility to manipulate (reformat, subset, trim...) multiple sequence alignments
- tree_tools utility to manipulate (rename, prune, set output...) trees in newick format
- phylo_context given protein sequences, build and draw a tree to identify phylogenetic (sub)families
- show_tree flexible tool to visualize an input protein tree in newick format
Run any tool with option -h to display its usage.
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