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Marco Mariotti

Username    mmariotti
Date joined   Joined

16 projects

twinstop

Last released

twinstop identifies selenoproteins in close related transcriptomes

pyranges1

Last released

GenomicRanges for Python.

pyranges-plot

Last released

'Genomic intervals data visualization package for dataframe objects generated with PyRanges.'

orf-tools

Last released

Tools to work with open reading frames (ORFs)

pyranges

Last released

GenomicRanges for Python.

pyaln

Last released

Read, process, write multiple sequence alignments in Python

selenoprofiles4

Last released

Gene finding pipeline for selenoprotein and selenocysteine machinery

easybioinfo

Last released

Convenient python functions for bioinformatics

extend-orfs-pyranges

Last released

Fork of Joan Pallares extend_orf based on pyranges

file-chunk-iterators

Last released

Python classes to iterate through files in chunks

secmarker

Last released

secmarker description

easyterm

Last released

convenient python functions for everyday use of terminal

qjob

Last released

Utility to split shell commands into jobs, then submit them for computation to a queue of a SGE or Slurm cluster.

biotree-tools

Last released

Collection of bioinformatics tools related to alignments and phylogenetic trees

ncbi-db

Last released

Collection of scripts that wrap the Entrez Bio python module, to query and download portions of NCBI databases

ensembl-assembly

Last released

Utility to search and download Ensembl data such as genome assemblies and gene annotations

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