brisktyper 0.1.9

Genome pre-processing pipeline for BRisk

BRiskTyper

Genome pre-processing pipeline for BRisk

Overview

BRiskTyper is a genomic pre-processing pipeline for BRisk.

Post issues at https://github.com/lmc297/BRiskTyper/issues.

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Installation

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Citation

If you found the BRiskTyper tool, its source code, and/or any of its associated databases useful, please cite:

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Quick Start

Command Structure

brisktyper -i [fasta] -o [output directory] [options...]

For help, type brisktyper -h or brisktyper --help

For your current version, type brisktyper --version

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Disclaimer: BRiskTyper is pretty neat! However, no tool is perfect, and BRiskTyper cannot definitively prove whether an isolate is pathogenic or not. As always, interpret your results with caution. We are not responsible for taxonomic misclassifications, misclassifications of an isolate's pathogenic potential or industrial utility, and/or misinterpretations (biological, statistical, or otherwise) of BRiskTyper results.