10 projects
sismis
Secretion system discovery tool.
gecco
Gene Cluster prediction with Conditional random fields.
igua
Iterative Gene clUster Analysis, a high-throughput method for gene cluster family identification.
flexo-tool
Flexible Locator for Exotoxins.
gecco-tool
Gene Cluster prediction with Conditional random fields. (renamed to gecco)
brisktyper
Genome pre-processing pipeline for BRisk
pyskani
PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.
orthoani
A Python implementation of the OrthoANI algorithm for nucleotide identity measurement. (renamed to pyorthoani)
pyfastani
Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
btyper3
In silico taxonomic classification of Bacillus cereus group isolates using assembled genomes
