CAMEL core

CAMEL core is a set of utilities used by Bioinformatics Platform at the Belgian Public Health institute (Sciensano).

This package is not meant to be used directly, but contains functionality that is shared between various projects.

Functionality

Command execution through subprocess
Input/output (IO) classes for handling tool / input output
Utility functions for handling common bioinformatics formats such as FASTA, FASTQ, VCF, BAM
Generating HTML reports with python code
Utility functions for executing Snakemake
A basic logger

CAMEL core is available as a pip package for Python >=3.12.

pip install camel-core

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution for camel-core 0.1.8
File	Size	Uploaded
camel_core-0.1.8.tar.gz	297.9 kB	Sep 8, 2026	Details

Table of built distributions (wheels) for camel-core 0.1.8
File	Interpreter	ABI	Platform	Reset
camel_core-0.1.8-py3-none-any.whl 278.7 kB Sep 8, 2026	Python 3	none	any	Details

Total release size: 576.6 kB

Download URL	camel_core-0.1.8.tar.gz
Size	297.9 kB
Tags	Source
SHA-256 checksum How to use checksums	`c82942e574d795e9a52325b056829698d4c0d4c35e7a7380564f355ca0de68ef`
BLAKE2b-256 checksum How to use checksums	`af455236373b7884670e9c6c33496f18c8a108d0f2e334f57a4dc13412c5dd4e`
Upload date	Sep 8, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/7.0.0 CPython/3.12.3`

Download URL	camel_core-0.1.8-py3-none-any.whl
Size	278.7 kB
Tags	Python 3
SHA-256 checksum How to use checksums	`b70171523e1241c714863379ef2b1aa346adc301cce47dc12134e6692cd8eb65`
BLAKE2b-256 checksum How to use checksums	`ef088be43349159e754451525af8fbc156d193c55287a0bdd9879ac3fec9053f`
Upload date	Sep 8, 2026
Uploaded using Trusted Publishing? What is trusted publishing?	No
Uploaded via	`twine/7.0.0 CPython/3.12.3`