napari plugin providing an interface to CAREamics.
Project description
CAREamics napari plugin
CAREamics is a PyTorch library aimed at simplifying the use of Noise2Void and its many variants and cousins (CARE, Noise2Noise, N2V2, P(P)N2V, HDN, muSplit etc.).
Why CAREamics?
Noise2Void is a widely used denoising algorithm, and is readily available from the n2v
python package. However, n2v is based on TensorFlow, while more recent methods
denoising methods (PPN2V, DivNoising, HDN) are all implemented in PyTorch, but are
lacking the extra features that would make them usable by the community.
The aim of CAREamics is to provide a PyTorch library reuniting all the latest methods in one package, while providing a simple and consistent API. The library relies on PyTorch Lightning as a back-end. In addition, we will provide extensive documentation and tutorials on how to best apply these methods in a scientific context.
This package provide a plugin for the napari viewer.
Installation and use
Check out the documentation for installation instructions and guides!
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test_and_deploy.yml on CAREamics/careamics-ui
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test_and_deploy.yml on CAREamics/careamics-ui
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