A Keras-based entity embedding encoder for tabular ML and GBM pipelines
Project description
Category Embedding
A Keras-based neural encoder for categorical variables in tabular machine learning.
It learns dense vector representations (embeddings) for categorical features and outputs a clean numeric DataFrame that integrates seamlessly with gradient-boosted tree models.
This library is designed for ML engineers who want the benefits of deep-learning-based embeddings without replacing their GBM models.
It is sklearn-compatible, deterministic, and production-ready.
🚀 Features
-
Multi-column categorical embeddings
Each categorical feature receives its own learned embedding matrix. -
Smart default embedding dimensions
Uses a simple, interpretable rule:- If
n_cat ≤ 10:dim = n_cat - 1 - Else:
dim = max(10, n_cat // 2) - Always capped at 50.
- If
-
Per-column embedding dimension overrides
Pass a list of integers to control embedding size manually. -
Hashing for unseen categories
Unseen values at inference time are deterministically mapped into valid embedding indices. -
Residual MLP architecture
LayerNorm + GELU + Dropout + skip connections for stable training. -
Supports regression and binary classification
The neural head is used only for training/tuning; GBMs remain the final predictor. -
Optional external validation set
Enables clean early stopping and stable embedding learning. -
Sklearn-compatible API
Implementsfit,transform,predict, andget_feature_names_out. -
Outputs a pandas DataFrame
Perfect for LightGBM, XGBoost, CatBoost, or any sklearn model.
📦 Installation
pip install category-embedding
Requires:
- Python ≥ 3.9
- TensorFlow ≥ 2.12
- scikit-learn ≥ 1.2
- pandas ≥ 1.5
🔧 Quick Start
import pandas as pd
import lightgbm as lgb
from category_embedding import CategoryEmbedding
df = pd.DataFrame({
"country": ["DE", "FR", "DE", "US", "US"],
"device": ["mobile", "desktop", "tablet", "mobile", "desktop"],
"age": [25, 40, 31, 22, 35],
})
y = [10.5, 20.1, 15.3, 8.7, 18.0]
enc = CategoryEmbedding(
task="regression",
categorical_cols=["country", "device"],
numeric_cols=["age"],
epochs=20,
batch_size=32,
)
enc.fit(df, y)
X_emb = enc.transform(df)
train_ds = lgb.Dataset(X_emb, label=y)
params = {"objective": "regression", "metric": "rmse"}
model = lgb.train(params, train_ds, num_boost_round=200)
🧠 Why Use Category Embedding?
Traditional encoders struggle with:
- high-cardinality categorical features
- sparse interactions
- noisy or rare categories
Neural embeddings solve this by learning dense, continuous representations that capture similarity structure between categories.
This library gives you:
- the power of deep learning
- the simplicity and performance of GBMs
- a clean sklearn interface
- deterministic, production-ready behavior
⚙️ API Overview
CategoryEmbedding(...)
Key parameters:
- task: "regression" or "classification"
- categorical_cols: list of categorical column names
- numeric_cols: list of numeric column names
- embedding_dims: optional list of per-column embedding sizes
- hidden_units: width of each residual block
- n_blocks: number of residual blocks
- dropout_rate: dropout inside residual blocks
- lr: learning rate
- batch_size, epochs
- val_set: optional (X_val, y_val) tuple for early stopping
.fit(X, y)
Trains the embedding model.
.transform(X)
Returns a DataFrame containing all learned embeddings and numeric features.
.predict(X)
Uses the neural head for tuning/evaluation.
.get_feature_names_out()
Returns the names of the output columns.
📊 Example: Using Embeddings with XGBoost
import xgboost as xgb
X_train_emb = enc.transform(X_train)
X_test_emb = enc.transform(X_test)
dtrain = xgb.DMatrix(X_train_emb, label=y_train)
dtest = xgb.DMatrix(X_test_emb, label=y_test)
params = {"objective": "reg:squarederror"}
model = xgb.train(params, dtrain, num_boost_round=300)
🔑 Keywords
machine learning, deep learning, tabular data, categorical encoding, entity embeddings, category embeddings, neural encoder, keras, tensorflow, scikit-learn, sklearn transformer, feature engineering, gradient boosting, lightgbm, xgboost, embeddings for gbm, high-cardinality features, optuna tuning, ml pipelines
📄 License
This project is licensed under the MIT License. See the LICENSE file for details.
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