Utility package to run CHM jobs on clusters
Project description
chmutil
Utility package to run Cascaded Hierarchical Model (CHM) jobs on clusters.
For more information visit our wiki page
Tools
chmrunner.py – Runs CHM job with specific jobid
createchmjob.py – Creates a set of CHM jobs to process a set of images
checkchmjob.py – Generates script that can be used to run CHM jobs created by createchmjob.py on various compute clusters (Gordon, Comet, & Rocce)
Dependencies
CHM singularity image (not required to build this software, but is needed to run the jobs)
Compatibility
Should work on Python 2.7 & 3+ on Linux distributions
Installation
Try one of these:
pip install chmutil
Usage
# creates a job assuming images are in ./images and ./trainedmodel has # chm model createchmjob.py ./images ./trainedmodel myrun --cluster rocce
License
See LICENSE.txt
Bugs
Please report them here
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
History
0.5.0 (2017-01-11)
First release on PyPI.
Project details
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