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Username    coleslaw481
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28 projects

cellmaps-generate-hierarchy

Last released

A tool to generate hierarchies from protein to protein interaction networks

cellmaps-utils

Last released

Contains utilities needed by Cell Maps tools

cellmaps-pipeline

Last released

Runs full Cell Maps pipeline

cellmaps-hierarchyeval

Last released

A tool to evaluate hierarchies with known resources

cellmaps-coembedding

Last released

A tool to generate coembeddings from IF image embeddings and PPI network embeddings

cdapsutil

Last released

Python utilities for CDAPS

ndex2

Last released

Nice CX Python includes a client and a data model.

cellmaps-vnn

Last released

Python Boilerplate contains all the boilerplate you need to create a Python package with command line

cellmaps-ppi-embedding

Last released

A tool to generate embeddings from networks

cellmaps-image-embedding

Last released

A tool to generate embeddings from HPA IF images

cellmaps-ppidownloader

Last released

A tool to download AP-MS data for Cell Maps pipeline

cellmaps-imagedownloader

Last released

A tool to download specified image data from the Human Protein Atlas website using CSV file or to copy data from CM4AI dataset

hidef

Last released

A package for building a hierarchy based on multiple partitions on graph nodes.

ndexstringloader

Last released

Loads STRING data into NDEx

ndexutil

Last released

Unsupported NDEx utilities

ndexsignorloader

Last released

Loads SIGNOR data into NDEx

netcoloc

Last released

ndexncipidloader

Last released

Loads NCI-PID data into NDEx

naga-gwas-rest

Last released

REST service for Network Assisted Genomic Analysis (NAGA)

ndexbiogridloader

Last released

Loads BioGRID data into NDEx

ndexgenehancerloader

Last released

Loads GeneHancer database to NDEx

d3r

Last released

Drug Design Data Resource CELPP Runner is an application to run the filtering, docking, and evaluation of new sequences from wwpdb

naga-gwas

Last released

Network Assisted Genomic Association

ndex-webapp-python-exporters

Last released

Command line exporters written in Python used by the NDex REST service

ndex2-dev

Last released

Nice CX Python includes a client and a data model.

ncmirtools

Last released

Set of commandline tools for NCMIR

chmutil

Last released

Utility package to run CHM jobs on clusters

ndex

Last released

NDEx Python includes a client and a data model.

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