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A statically type-safe DataFrame abstraction layer

Project description

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Colnade

CI Coverage PyPI Python 3.10+

A statically type-safe DataFrame abstraction layer for Python.

Colnade replaces string-based column references (pl.col("age")) with typed descriptors (Users.age), so column misspellings and type mismatches are caught by your type checker — before your code runs.

Works with ty, mypy, and pyright. No plugins, no code generation.

Installation

pip install colnade colnade-polars

Colnade requires Python 3.10+. Install the backend adapter for your engine:

Backend Install
Polars pip install colnade-polars
Pandas pip install colnade-pandas
Dask pip install colnade-dask

Quick Start

1. Define a schema

import colnade as cn

class Users(cn.Schema):
    id: cn.Column[cn.UInt64]
    name: cn.Column[cn.Utf8]
    age: cn.Column[cn.UInt64]
    score: cn.Column[cn.Float64]

2. Create or read typed data

from colnade_polars import from_rows, read_parquet

# From Python data — schema drives dtype coercion
df = from_rows(Users, [
    Users.Row(id=1, name="Alice", age=30, score=85.0),
    Users.Row(id=2, name="Bob", age=25, score=92.5),
])

# Or from files
df = read_parquet("users.parquet", Users)
# df is DataFrame[Users] — the type checker knows the schema

3. Transform with type safety

# Column references are attributes, not strings
result = (
    df.filter(Users.age > 25)
      .sort(Users.score.desc())
      .select(Users.name, Users.score)
)

4. Bind to an output schema

class UserSummary(cn.Schema):
    name: cn.Column[cn.Utf8]
    score: cn.Column[cn.Float64]

output = result.cast_schema(UserSummary)
# output is DataFrame[UserSummary]

Safety Model

Colnade catches errors at three levels:

  1. In your editor — misspelled columns, schema mismatches at function boundaries, and nullability violations are flagged by your type checker (ty, pyright, mypy) before code runs
  2. At data boundaries — runtime validation ensures files and external data match your schemas (columns, types, nullability) and that expressions reference columns from the correct schema
  3. On your data valuesField() constraints validate domain invariants like ranges, patterns, and uniqueness

Where static safety ends: Static checking covers column references and schema-preserving operations (filter, sort, with_columns). Schema-transforming operations (select, group_by) return DataFrame[Any] — you call cast_schema() to assert the output schema, and runtime validation (if enabled) verifies it. No type checker plugin is needed, but this means output schemas aren't inferred statically. See Type Checker Integration for the full list of what is and isn't checked.

Key Features

Type-safe column references

Column references are class attributes verified by the type checker at lint time:

Users.name   # Column[Utf8] — valid
Users.naem   # ty error: Class `Users` has no attribute `naem`

Schema-preserving operations

Operations that don't change the schema (filter, sort, limit, with_columns) preserve the type parameter:

def process(df: DataFrame[Users]) -> DataFrame[Users]:
    return df.filter(Users.age > 25).sort(Users.score.desc())

Typed expressions

Column descriptors build an expression tree with typed operators:

Users.age > 18          # Expr[Bool] — comparison
Users.score * 2         # Expr[Float64] — arithmetic
(Users.age > 18) & (Users.score > 80)  # Expr[Bool] — logical
Users.name.str_starts_with("A")        # Expr[Bool] — string method

Aggregations

class UserStats(cn.Schema):
    name: cn.Column[cn.Utf8]
    avg_score: cn.Column[cn.Float64]
    user_count: cn.Column[cn.UInt64]

result = df.group_by(Users.name).agg(
    Users.score.mean().alias(UserStats.avg_score),
    Users.id.count().alias(UserStats.user_count),
)

Conditional expressions

df.with_columns(
    cn.when(Users.age > 65).then(cn.lit("senior")).otherwise(cn.lit("standard")).alias(Users.tier)
)

Vertical concatenation

combined = cn.concat(df_jan, df_feb, df_mar)  # DataFrame[Sales]

Null handling

# Fill nulls, filter nulls, check nulls
df.with_columns(Users.score.fill_null(0.0).alias(Users.score))
df.filter(Users.score.is_not_null())
df.drop_nulls(Users.score)

Joins with typed output

joined = users.join(orders, on=Users.id == Orders.user_id)
# JoinedDataFrame[Users, Orders] — both schemas accessible

# mapped_from tells cast_schema which source column maps to each target column
class UserOrders(cn.Schema):
    user_name: cn.Column[cn.Utf8] = cn.mapped_from(Users.name)
    amount: cn.Column[cn.Float64]  # same name as Orders.amount — matched automatically

result = joined.cast_schema(UserOrders)

Schema-polymorphic utility functions

Write generic functions that work with any schema:

from colnade.schema import S

def first_n(df: cn.DataFrame[S], n: int) -> cn.DataFrame[S]:
    return df.head(n)

# Works with any schema — type preserved
users_subset: cn.DataFrame[Users] = first_n(users_df, 10)

Struct and List support

class Address(cn.Schema):
    city: cn.Column[cn.Utf8]
    zip_code: cn.Column[cn.Utf8]

class UserProfile(cn.Schema):
    name: cn.Column[cn.Utf8]
    address: cn.Column[cn.Struct[Address]]
    tags: cn.Column[cn.List[cn.Utf8]]
    tag_count: cn.Column[cn.UInt32]

# Access nested data
df.filter(UserProfile.address.field(Address.city) == "New York")
df.with_columns(UserProfile.tags.list.len().alias(UserProfile.tag_count))

Value-level constraints

import colnade as cn

class Users(cn.Schema):
    id: cn.Column[cn.UInt64] = cn.Field(unique=True)
    age: cn.Column[cn.UInt64] = cn.Field(ge=0, le=150)
    email: cn.Column[cn.Utf8] = cn.Field(pattern=r"^[^@]+@[^@]+\.[^@]+$")
    status: cn.Column[cn.Utf8] = cn.Field(isin=["active", "inactive"])

    @cn.schema_check
    def adult(cls):
        return Users.age >= 18

# Validate with df.validate() or auto-validate at the FULL level
cn.set_validation(cn.ValidationLevel.FULL)

Lazy execution

from colnade_polars import scan_parquet

lazy = scan_parquet("users.parquet", Users)
# LazyFrame[Users] — builds a query plan

result = lazy.filter(Users.age > 25).sort(Users.score.desc()).collect()
# Executes the optimized query plan

Performance

Colnade translates an expression AST into engine-native calls, adding a fixed cost per operation that doesn't grow with dataset size. For Polars and Pandas, this overhead is below the measurement noise floor — benchmarked pipelines (filter + sort + select) show no measurable difference from 100 to 1M rows. Dask graph construction adds ~200–300 us per operation, negligible compared to .compute() time.

Pipeline overhead vs dataset size — Raw Polars and Colnade lines overlap completely

Validation (STRUCTURAL, FULL) adds measurable cost at data boundaries and is designed for development/CI, not production hot paths. See the full benchmark results for details.

Type Checker Error Showcase

Colnade catches real errors at lint time. Here are actual error messages from ty:

ty catching Colnade type errors — misspelled column, schema mismatch, nullability mismatch

Comparison with Existing Solutions

Feature Colnade Pandera StaticFrame Patito Narwhals
Column refs checked statically Named attrs No Positional types No No
Schema preserved through ops Through ops¹ At boundaries² Positional No No
Works with existing engines Polars, Pandas, Dask Pandas, Polars, others Own engine Polars only Many engines
No plugins or code gen Yes Optional mypy plugin Yes Yes Yes
Generic utility functions Yes No No No No
Struct/List typed access Yes No No No No
Lazy execution support Yes No No No Yes
Value-level constraints Field() Check CallGuard Pydantic validators No
Maturity / ecosystem New (v0.8) Mature, large community Mature Small Growing fast
Engine breadth 3 backends 4+ backends Own engine 1 backend 6+ backends
select/group_by output typing DataFrame[Any]³ Decorator-checked Positional types No No

¹ Schema-preserving ops (filter, sort, with_columns) retain DataFrame[S]. Schema-transforming ops (select, group_by) return DataFrame[Any] — use cast_schema() to bind. ² Pandera supports Polars (since v0.19), Pandas, and others. @check_types validates schemas at function boundaries, but column references within function bodies remain unchecked strings. ³ cast_schema() re-binds at runtime. A type checker plugin could theoretically infer output schemas, but Colnade intentionally avoids plugin coupling.

See Detailed Comparisons for a fuller discussion of tradeoffs.

Documentation

Full documentation is available at colnade.com, including:

Examples

Runnable examples are in the examples/ directory:

Limitations

Colnade provides static type safety for the most common DataFrame operations, but it is not a complete static type system for DataFrames. Know these limitations before adopting:

  • select() and group_by().agg() return DataFrame[Any] — these operations change the column set, so the output schema must be asserted via cast_schema(). A type checker plugin could infer output schemas, but Colnade intentionally avoids plugin coupling.
  • Joins require cast_schema()JoinedDataFrame is a transitional type. You must cast_schema() to a flat output schema before further operations like group_by.
  • Runtime validation is OFF by default — set cn.set_validation("structural") or COLNADE_VALIDATE=structural to enable. Validation adds overhead and is designed for development/CI.
  • List accessor returns Any.list operations produce ListOp[Any] due to a ty limitation with property self-types. The annotations are in place and will become precise in a future ty release.

See Type Checker Integration for the full list of what is and isn't checked statically.

License

MIT

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