This release is a pre-release and may not be stable for production use.
Consenrich
Consenrich estimates shared latent regulatory signals from noisy, multi-sample epigenomic sequencing measurements
Input: Sequencing data in BAM, 10x fragments, or other supported formats from bulk or single-cell ATAC-seq, DNase-seq, ChIP-seq, CUT&RUN, CUT&Tag, or related assays.
Output: Consensus signal estimate tracks (bedGraph, bigWig), associated uncertainty/background tracks (bedGraph, bigWig), and optional consensus peak calls (narrowPeak, gappedPeak, BED).
Manuscript Preprint and Citation
BibTeX Citation
@article {Hamilton2025,
author = {Hamilton, Nolan H and Huang, Yu-Chen E and McMichael, Benjamin D and Love, Michael I and Furey, Terrence S},
title = {Genome-Wide Uncertainty-Moderated Extraction of Signal Annotations from Multi-Sample Functional Genomics Data},
year = {2025},
doi = {10.1101/2025.02.05.636702},
publisher = {Cold Spring Harbor Laboratory},
journal = {bioRxiv}
}
1 maintainer
Metadata
1 maintainer
Release files for consenrich 0.11.7a0
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
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| consenrich-0.11.7a0.tar.gz | 12.3 MB | With provenance | Details |
Built distributions (wheels)
Total release size: 459.4 MB
Release files / consenrich-0.11.7a0.tar.gz
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