Cosmos
Update
v1.0: July 15, 2025
- Initial Version of Cosmos
Overview
Cosmos is a Python package for multi-phenotype deep mutational scanning analysis. Specifically, it is suitable for two sequential protein functional phenotypes, one upstream and one downstream - for example, abundance and activity.
Installation
pypi
pip install cosmos-dms
From source
Source code can be found on the GitHub repo pimentellab/cosmos
Cosmos uses Poetry for environment and dependency management.
To install Cosmos, follow these steps:
- Install Poetry (if not already installed). Please follow the guideline on Poetry's official documentation.
- Clone the repository.
git clone https://github.com/pimentellab/cosmos.git
cd cosmos
- Install and activate the environment.
poetry lock
poetry install
Getting started
Check out the vignette/ directory in the source code.
1 maintainer
Metadata
1 maintainer
Release files for cosmos-dms 1.0.2
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| cosmos_dms-1.0.2.tar.gz | 29.0 kB | Without provenance | Details for cosmos_dms-1.0.2.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| cosmos_dms-1.0.2-py3-none-any.whl | Python 3 | none | any | Details for cosmos_dms-1.0.2-py3-none-any.whl |
Total release size: 67.2 kB
Release files / cosmos_dms-1.0.2.tar.gz
| Download URL | cosmos_dms-1.0.2.tar.gz |
|---|---|
| Size | 29.0 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.9.13
|
Release files / cosmos_dms-1.0.2-py3-none-any.whl
| Download URL | cosmos_dms-1.0.2-py3-none-any.whl |
|---|---|
| Size | 38.2 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/6.1.0 CPython/3.9.13
|
Security for cosmos-dms 1.0.2
Provenance
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No provenance found
None of the files in this release were uploaded with provenance metadata.
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