cytozip: Chunk based ZIP for cytosine data
Project description
Chunk ZIP
Installation
pip install ChunkZIP
#or
pip install git+http://github.com/DingWB/cytozip
Implementation
| allcools | ballcools | cytozip | |
|---|---|---|---|
| Format | .tsv.gz | .ballc | .cz |
| Compression algorithm | bgzip | bgzip | cytozip |
| Support Random Access ? | Yes | Yes | Yes |
| Need extra index file for query? | Yes | yes | No |
| Quickly Merge? | No | No | Yes |
Usage
Example dataset
https://figshare.com/articles/dataset/czip_example_data/25374073
dev
python setup.py build_ext --inplace
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
cytozip-0.0.2.tar.gz
(348.2 kB
view details)
File details
Details for the file cytozip-0.0.2.tar.gz.
File metadata
- Download URL: cytozip-0.0.2.tar.gz
- Upload date:
- Size: 348.2 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.13.7
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
ffb1fbf436883f0e156858641a63fa8635f5985753719d1c6ed1a26e241af9cf
|
|
| MD5 |
32955755b6d89bfcf50a4bc5520cdbc7
|
|
| BLAKE2b-256 |
d4c74b345fa35a6105dbfcdd53fbeeaa3e587b290b33957e74aea47b57f7da76
|
