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Automatically processes data files in directories, converts array-like strings to NumPy arrays, detects and fixes data type issues, and saves results as optimized Parquet files and MORE!

Project description

deepcsv

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"You think you saved a list. You open it tomorrow — and it's a string."

deepcsv was built to solve exactly this problem.


The Problem

Your CSV files are lying to you.

You save a list — you open it tomorrow and it's a string. Your column has numbers — it secretly has 3 different data types. You have 200 CSV files across 40 folders — and you process them one by one. You load a file and spend 20 minutes just picking the right reader. You have nulls scattered everywhere with no clean way to handle them. You have alot of mixed DTypes columns no way to handle one by one

This is the silent killer of every data pipeline.


The Solution

deepcsv handles all of this in one import.

  • Walks through every folder and subfolder automatically
  • Finds every CSV and XLSX file
  • Detects columns storing lists as strings and converts them to real NumPy arrays
  • Catches mixed-type columns and fixes them automatically
  • Saves everything in any format you choose — not just Parquet
  • Reads any file format with one function — no more picking the right reader
  • Cleans nulls with full control over columns, rows, indexes, values, and Fix Mixed DTypes

Installation

pip install deepcsv

Functions

process_file(data_input, file_format= str, to_list=False)

Reads a file or DataFrame, converts array-like strings to NumPy arrays, fixes mixed-type columns, and optionally saves the result in any format you choose.

import deepcsv

# Process only
df = deepcsv.process_file('path/to/file.csv')

# Process and save as parquet
df = deepcsv.process_file('path/to/file.csv', file_format='parquet')

# Process and save as Excel
df = deepcsv.process_file('path/to/file.csv', file_format='xlsx')

# Process and convert it to Real Python List
df = deepcsv.process_file('path/to/file.csv', to_list=True)

Supported file formats: .csv .tsv .txt .xlsx .json .parquet .pkl .feather .html .xml


process_all_files(directory_path, output_dir="All CSV Files is Converted Here", file_format="parquet", to_list=False)

Walks through all folders and subfolders, applies process_file on every supported file, and saves results in the format you choose.

import deepcsv

# Default — saves as parquet
deepcsv.process_all_files('path/to/folder')

# Custom output folder
deepcsv.process_all_files('path/to/folder', output_dir='Converted Files')

# Save as CSV instead
deepcsv.process_all_files('path/to/folder', file_extension='csv')

Supported input formats: .csv .txt .tsv .xls .xlsx .json .parquet .pkl .feather .db .sqlite


read_any(file_path)

Reads any supported file format and returns a pandas DataFrame — one function for everything.

from deepcsv import read_any

df = read_any('data/users.csv')
df = read_any('reports/sales.xlsx')
df = read_any('warehouse/orders.parquet')
df = read_any('local.db')

Supported formats: .csv .txt .tsv .xls .xlsx .json .parquet .pkl .feather .db .sqlite


clean_values(data_input, ...)

Cleans a DataFrame by removing nulls, specific values, specific types, or rows by index — with full control over which columns to target and optional conditions.

from deepcsv import clean_values

# Drop fully-null columns
df = clean_values('data.csv', cols=['age', 'salary'])

# Drop rows that have nulls in specific cols
df = clean_values('data.csv', cols=['age', 'salary'], ax_0=True)

# Drop rows by index
df = clean_values(df, index=[0, 5, 12])

# Remove rows where a specific value exists
df = clean_values(df, cols=['status'], finding_value='N/A')

# Remove rows where value meets a condition
df = clean_values(df, cols=['score'], finding_value='N/A', condition=['>=', 500])

# Remove rows by Python type
df = clean_values(df, cols=['age'], finding_type=str)

# Apply on all columns except some
df = clean_values('data.csv', all_cols_except=['id', 'name'])
Parameter Type Default Description
data_input str | DataFrame required File path or DataFrame
cols list None Columns to apply on
ax_0 bool False True: drop rows with nulls — False: drop fully-null cols
index list None Row indexes to drop
condition list None [operator, value] — ex: ['>=', 500]
all_cols_except list None Apply on all columns except these
finding_value any None Find and remove rows containing this value
finding_type type None Find and remove rows matching this Python type

Supported condition operators: >= <= > < == !=


auto_fix(data_input)

Automatic data type correction in DataFrames for solving mixed Dtypes with logg to track changes made to columns.

from deepcsv import auto_fix

df = auto_fix('My_Data')

Function Signatures

process_file(data_input: Union[str, pd.DataFrame], save_file_extension: str = None) -> pd.DataFrame
process_all_files(directory_path: str, output_dir: str = "All CSV Files is Converted Here", file_extension: str = "parquet") -> None
read_any(file_path: str) -> pd.DataFrame
clean_values(data_input, cols=None, ax_0=False, index=None, condition=None, all_cols_except=None, finding_value=None, finding_type=None) -> pd.DataFrame
auto_fix(data_input: Union[str, pd.DataFrame])

Key Features

  • String list → real NumPy array conversion (fast, no manual parsing)
  • Mixed-type column detection and auto-fix
  • Save in any format — CSV, Excel, JSON, Parquet, Feather, and more
  • One universal file reader for 10+ formats
  • Flexible null cleaning by column, row, index, value, or type
  • Conditional filtering with 6 operators
  • Recursive directory traversal
  • Warning messages for full transparency

Notes

  • Requires pyarrow for Parquet and Feather support
  • Only saves files in process_all_files if the DataFrame contains converted array columns

Requirements

  • Python >= 3.7
  • pandas
  • pyarrow

By: Abdullah Bakr

Changelog


Added

  • process_file() — Converting any columns have Numbers as strings to Numerical Values (Float)
  • save_as — Added function to save dataset file

Fixes

  • process_file() — Fixed some bugs in file_format parameter

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