Skip to main content
Join the official 2020 Python Developers SurveyStart the survey!

Demultiplex any number of FASTA or a FASTQ files based on a list of barcodes

Project description

Versatile NGS demultiplexer with the following features:

  • Support for FASTA and FASTQ files.
  • Support for multiple reads per fragment, e.g., paired-end.
  • Handles barcodes in the header and in the reads.
  • Handles barcodes at unknown locations in reads (e.g., PacBio or Nanopore barcodes).
  • Support for selection of part of a barcode.
  • Allows for mismatches, insertions and deletions.
  • Barcode guessing by frequency or fixed amount.
  • Handles large numbers (over one million) of barcodes.

Please see ReadTheDocs for the latest documentation.

Project details

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for demultiplex, version 1.1.0
Filename, size File type Python version Upload date Hashes
Filename, size demultiplex-1.1.0.tar.gz (5.2 kB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page