Streamlit annotation tool for Digital Registrar pathology reports.
Project description
digital-registrar-annotator
Streamlit annotation tool for Digital Registrar pathology reports. Lets clinicians review and correct pipeline pre-annotations against the gold schema.
Install
pip install digital-registrar-annotator
# Workspace mode (with/without pre-annotations subdirs):
registrar-annotate-workspace
# Dummy mode (for trying without real data):
registrar-annotate-dummy
# Legacy flat layout:
registrar-annotate
Default port: 8500.
Folder layouts
- Canonical (workspace / dummy):
{base}/with_preann/{dataset}/{dataset,result}/and{base}/without_preann/{dataset}/dataset/. - Legacy flat:
{base}/{prefix}_dataset_{date}/,{prefix}_result_{date}/,{prefix}_annotation_{date}/.
The annotator reads pre-generated JSON schemas from the installed digital_registrar.schemas.data package. No DSPy / LLM dependency.
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