Skip to main content

A simple API (build on top of the Django Model API) to store and manage MIP (molecular inversion probe) markers.

Project description

A simple API (build on top of the Django Model API) to store and manage MIP (molecular inversion probe) markers. Detailed markers description e.g in [Science 338, 1619 (2012)].

Prerequisites

#### Python 2.7

Linux

probably, you already have it!

Windows

download & install: https://www.python.org/ftp/python/2.7.10/python-2.7.10.msi
remember to select “Add python.exe to Path”

#### pip & virtualenv (optional)

Linux (Ubuntu/Debian)

sudo apt-get install python-pip python-dev build-essential sudo pip install –upgrade pip sudo pip install –upgrade virtualenv

Windows

With Python 2.7.10 version, pip is a part of the Python for Windows installer.

Windows alternatively: pip can be downloaded with this script: [get-pip.py], and installed by running in console:

C:> python get-pip.py

Requirements

#### Django 1.7-1.8

pip install django

#### Python-PostgreSQL Database Adapter

Linux

pip install psycopg2

Windows

pip install git+https://github.com/nwcell/psycopg2-windows.git@win32-py27#egg=psycopg2

Windows alternatively: download & install from win-psycopg project site - e.g. [psycopg2]

http://stickpeople.com/projects/python/win-psycopg/

Setup

#### outside Django project, in python scripts:

  • set database connection details in mips.dbsettings_default.py

  • set the DJANGO_SETTINGS_MODULE environment variable to “mips.settings”

    import os os.environ.setdefault(“DJANGO_SETTINGS_MODULE”, “mips.settings”)

  • set up Django: django.setup()

    import django django.setup()

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
django-mips-0.3.2.tar.gz (175.6 kB) Copy SHA256 hash SHA256 Source None

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN SignalFx SignalFx Supporter DigiCert DigiCert EV certificate StatusPage StatusPage Status page