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A toolbox for rigid and nonrigid registration of images.

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The napari plugin for elastix, a toolbox for rigid and nonrigid registration of images, based on itk-elastix.

For a demo video see youtube channel. For tutorials on how to use elastix, see our Jupyter notebooks.

To find parameters that work well with specific datasets, see the elastix Model Zoo.

Screenshot 2021-05-12 at 15 07 24


You can install elastix-napari via pip:

pip install elastix-napari


Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.


Distributed under the terms of the Apache Software License 2.0 license, "elastix-napari" is free and open source software


If you encounter any problems, please file an issue along with a detailed description.

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