A plugin to navigate a .nd2 file (confocal movie) and annotate nuclei using ellipses.
Project description
ellipse-nuclei-segmentation
A plugin to navigate a .nd2 file (confocal movie) and annotate nuclei using ellipses.
This napari plugin was generated with copier using the napari-plugin-template (None).
Installation
You can install ellipse-nuclei-segmentation via pip:
pip install ellipse-nuclei-segmentation
If napari is not already installed, you can install ellipse-nuclei-segmentation with napari and Qt via:
pip install "ellipse-nuclei-segmentation[all]"
To install latest development version:
pip install git+https://github.com/rmaguado/ellipse-nuclei-segmentation.git
Contributing
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
License
Distributed under the terms of the MIT license, "ellipse-nuclei-segmentation" is free and open source software
Issues
If you encounter any problems, please file an issue along with a detailed description.
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