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a package for ENrichment ANalyses

Project description


a package for ENrichment ANalyses.
the following methods have been implemented:

  • Fisher's exact test (FET)
  • Binomial test (BT)
  • Gene set enrichment analysis (GSEA)
  • single sample GSEA (ssGSEA)
  • Connectivity analysis


  • python 3.6
  • requirements: numpy, pandas, scipy, tqdm


pip install enan

  • for conda environment, please use skeleton


see samplecode.ipynb


This software is released under the MIT License.


MIZUNO Tadahaya


This package is inspired from the following brilliant databases and studies:

  • Nat Genet. 2003 Jul;34(3):267-73.
  • PNAS. October 25, 2005 102 (43) 15545-15550.
  • BMC Bioinformatics. 2013;128(14).
  • Enrichr: a comprehensive gene set enrichment analysis web server 2016 update. Nucleic Acids Research. 2016; gkw377 .
  • Science. 2006 Sep 29;313(5795):1929-35.
  • MsigDB
  • EnrichR
  • CMap

Bug Report

If you would like to report any bugs about this package, don't hesitate to create an issue on github here, or email me:

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