Epigenomics Single-Cell Analysis in Python.
Project description
EpiScanpy – Epigenomics single cell analysis in python
EpiScanpy is a toolkit to analyse single-cell open chromatin (scATAC-seq) and single-cell DNA methylation (for example scBS-seq) data. EpiScanpy is the epigenomic extension of the very popular scRNA-seq analysis tool Scanpy (Genome Biology, 2018) [Wolf18]. For more information, read scanpy documentation.
The documentation for epiScanpy is available here. If epiScanpy is useful to your research, consider citing epiScanpy.
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