Fast and flexible inference of the distribution of fitness effects (DFE), VCF-SFS parsing with ancestral allele and site-degeneracy annotation.
Project description
fastDFE 
fastdfe is a package for fast, flexible, and hierarchical inference of the distribution of fitness effects (DFE) from site frequency spectra (SFS). It also contains a versatile VCF-to-SFS parser with support for ancestral allele and site-degeneracy annotation.
Please see the documentation for all the details.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file fastdfe-1.3.3.tar.gz.
File metadata
- Download URL: fastdfe-1.3.3.tar.gz
- Upload date:
- Size: 164.3 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/2.4.1 CPython/3.11.0 Linux/6.17.0-1018-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
1519078bbf146d79fce033ee42c26190bdf3c347120310b4b8583635091b1a61
|
|
| MD5 |
12d5daa8a3176c20db407e4a70fcc0a0
|
|
| BLAKE2b-256 |
6ae2305b5e425c4b405b1f1b5414a014bc7a561979feda82fd0ddbddd87e9796
|
File details
Details for the file fastdfe-1.3.3-py3-none-any.whl.
File metadata
- Download URL: fastdfe-1.3.3-py3-none-any.whl
- Upload date:
- Size: 178.4 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: poetry/2.4.1 CPython/3.11.0 Linux/6.17.0-1018-azure
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
2924546a2eeb7935394db575401471c8a60a6f46e82ce33067937c885550104d
|
|
| MD5 |
74728b2c79f6874633df6191c7ab263b
|
|
| BLAKE2b-256 |
6985f04ac2fdd7bc41072870a61c2fcce796ca7584007f6c67751bd1219f2d86
|
